Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g0325 ATGCGTGTATATATAGGAAGAGACTTGGAGGAGGGAGGCACATTGGCCGTGACAGAAGAAATTGGGAGGTTGCAGTCGATGACAATGGACCTCCTGATAGAGTCTACCTCCGCCGCTCATTTCTCTGGTTGGCGTCCTTCCACGACGGCGTTGTCTTCTTCATTGTTATCTCCGACTGATGACGGTCTCATTGGCCCGACGCAGCCATTTGTGATCGGTGTCTCTGGAGGTACGGCATCAGGCAAAACCTCTGTGTGTGATATGATCATTCAACAACTGCAAGATCATAGAGTGGTGCTAGTCTGTCAGGACTCATTCTACCGTGGTTTAACAGAAGAAGAATTGAAACGCGTCCATGAATATAATTTTGATCATCCTGACGCCTTTGATACTGAGGAACTTGTAGAGTGTATCAGCAAGCTCCAATCTGGACAATCTGTTCATGTGCCAGTATATGATTTTAAGACACATCAGCGGTCGTCTGAAAAATATACGCAGGTCAATGCATCTGAGGTAATCGTTTTGGAGGGCATATTGGTTTTTCATGAGCAACGTGTCCGCGACATGATGAATATGAAAATCTTTGTTGACACAGATGCTGATGTAAGGCTTGCCCGCAGAATAAGACGTGATACCGTTGACAGGGGTAGAGACATACAGTCGGTACTGGAACAGTATTCAAAATTTGTCAAGCCTGCCTTTGATGATTTCATTCTTCCAACCAAAAAATATGCCGATATCATAATACCTCGGGGTAAAGAGAATGTGGTTGCAGTTGACTTGATTGTTCAACATATCCGCACTAAGCTTGGCCAACATAACCTCTGCAAAATATATCCAAATTTGAATGTTATCCACTCTACGTACCAGATTAGAGGCATGCACACTCTAATTCGTGACAAGAATATATCAAAGCACGATTTTGTTTTTTATTCAGATCGGCTCATTCGTTTGGTAGTGGAACACGGTCTAGGCCATTTGCCATTTACAGAAAAGCAGGTTATCACTCCTACAGGATCAATTTACACTGGAGTTGATTTTTGTAAGAAATTGTGCGGCGTATCCGTCATTCGAAGTGGTGAAAGCATGGAGAATGCTTTGCGCGCATGTTGTAAAGGAATTAAAATAGGAAAAATTCTCATCCACCGTCAAGGAGGTGATGAGACCCAGCTTATTTATGAGAAGCTTCCGAAAGATATTTCAGAGAGACATGTTCTCCTTTTGGACCCAGTACTTGGTACAGGTAACTCTGCGAGCCAAGCCATTGAGCTTCTCATACGAAAGGGAGTTCCCGAATCCCACATAATATTCCTCAACCTCATCTCTGCTCCTGAGGGAATACACCGGGTATGCAGACGTTTCCCATCCCTGCAAATAGTCACTTCGGAGATTGAAGTTGGACTAAATGAAGAGTTTCGAGTTATACCAGGGTTGGGAGAATTCGGAGACCGCTATTTCGGTACTGACGAGTAA 1473 0.4386 MRVYIGRDLEEGGTLAVTEEIGRLQSMTMDLLIESTSAAHFSGWRPSTTALSSSLLSPTDDGLIGPTQPFVIGVSGGTASGKTSVCDMIIQQLQDHRVVLVCQDSFYRGLTEEELKRVHEYNFDHPDAFDTEELVECISKLQSGQSVHVPVYDFKTHQRSSEKYTQVNASEVIVLEGILVFHEQRVRDMMNMKIFVDTDADVRLARRIRRDTVDRGRDIQSVLEQYSKFVKPAFDDFILPTKKYADIIIPRGKENVVAVDLIVQHIRTKLGQHNLCKIYPNLNVIHSTYQIRGMHTLIRDKNISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVITPTGSIYTGVDFCKKLCGVSVIRSGESMENALRACCKGIKIGKILIHRQGGDETQLIYEKLPKDISERHVLLLDPVLGTGNSASQAIELLIRKGVPESHIIFLNLISAPEGIHRVCRRFPSLQIVTSEIEVGLNEEFRVIPGLGEFGDRYFGTDE 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g0325 490 CDD UMPK 71 269 IPR000764 -
Lele23g0325 490 CDD PRTases_typeI 346 450 IPR000836 -
Lele23g0325 490 PRINTS Uridine kinase signature 215 226 - -
Lele23g0325 490 PRINTS Uridine kinase signature 144 159 - -
Lele23g0325 490 PRINTS Uridine kinase signature 99 110 - -
Lele23g0325 490 PRINTS Uridine kinase signature 201 211 - -
Lele23g0325 490 PRINTS Uridine kinase signature 69 86 - -
Lele23g0325 490 PRINTS Uridine kinase signature 237 250 - -
Lele23g0325 490 Gene3D - 273 488 IPR029057 -
Lele23g0325 490 PANTHER URIDINE KINASE 59 399 - -
Lele23g0325 490 Pfam Phosphoribulokinase / Uridine kinase family 71 257 IPR006083 GO:0005524|GO:0016301
Lele23g0325 490 FunFam Uridine kinase 66 272 - -
Lele23g0325 490 TIGRFAM udk: uridine kinase 70 269 IPR000764 -
Lele23g0325 490 FunFam Uridine kinase 273 488 - -
Lele23g0325 490 Gene3D - 66 272 IPR027417 -
Lele23g0325 490 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 66 262 IPR027417 -
Lele23g0325 490 SUPERFAMILY PRTase-like 272 489 IPR029057 -
Lele23g0325 490 Pfam Uracil phosphoribosyltransferase 287 488 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g0325 Lele-ChrLele23 2259989 2264978 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g0325 26 490 PRT Gene Family AT3G27190 76.875 0.0 758
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele23g0325 23 2259989 2264978 Lele23g0325 23 2259989 2264978 ECH
Lele21g1686 21 24818406 24825517 Lele23g0325 23 2259989 2264978 hybridization