Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g0295 ATGGACCAGATACAAGACCAGGAGCTCGCTCGCTCGCTTGGATCTTCTTCTCTGGTGTTTCTTCGTGTTGAGAGGAAGGGGCGTTATTTGTGTTGGACTCGTAAGGACCGATTTTGTAAATCCAATTGCTTCTCCTGTCTTGGCTCGAGATCCGGGCCAAGCACAGAAGAATCGGATTCAGATTTGCATTTGACTATCTTCAACCGCTCACAGATAATTATTTGCTGCGAGGGATTTCTGACAGATGAGCAGAGGGAAATGCTAAAAATTGCCAGCAATAATGTGGAAAATTTATCTTCATCCCCGAAATCTCCCACATCCTTTGTTGCTGACCATCATATAAAAGCTCCTGCTGGTAGTAAGGCCCAAACTGCTGGGATTGCTGTGAGGCATGTGCGGCGATCACACTCTGGAAAGCTTGTGCGGGTGAAGAAGGATAAACTTGATGCTTTCCTTATTTTGAATGTAGATGGTGCTGGTGGTAAGGGCACTTGGGGAAAATTGCTTGATACTGATGGTGAATCTCATATAGACAGGAAAGACCCAAATTATGATAGTGGTGAGGAACCCTATCAGCTGGTTGGGTCTACTGTCACTGACCCCTTAGATGAATTCAAGAAGGCTGTTGTTTCCACCATCGAGGAATATTTCAGCACTAGTGATGTGGAATTAGCTGCCTCTGATCTCAGAGAACTTGGTTCAAGTGAATATTATCCATACTTCATCAAGCGCCTTGTGTCTATGGCCATGGATAGACATGATAAGGAGAAAGAAATGGCTTCTGTTTTGCTTTCAGCATTGTATGCTGATGTGATTAGTCCTGCACAGATTAGGGATGGATTTTTTTTGCTTCTCGAATCTGCTGATGATCTTGCAGTGGACATACTGGATGCAGTTGACGTCCTTGCTTTGTTTCTGGCTCGGGCTGTTGTTGATGATATCCTTCCTCCAGCCTTTCTTGCCAGGGCAAGAAAGGCACTTCCTGAGTCATCCAAGGGGTTTCAAGTTATCCGGACTGCAGAGAAGAGTTATCTCTCAGCTCCACATCATGCAGAGCTTGTAGAGAGGCGATGGGGGGGTACCACTCACATCACTGTTGAAGAAGTAAAGAAGAAGATTTCTGATTTATTAAGAGAATATGTTGAAAGTGGTGATACGGTTGAAGCCTGCAGGTGCATAAGGGAGTTGGGGGTTTCATTCTTTCATCATGAGGTTGTGAAGAGGGCTCTGGTACTTGCCATGGAGATCCGTTCAGCAGAATCTTTAATGTTGAAGTTATTAAAAGAAGCAGCAGAAGAAGGGCTCATTAGTTCCAGCCAAATGGTGAAAGGTTTCTCTCGCTTGGCAGAAGGCCTAGATGATCTTGCTCTCGATATTCCATCAGCCAAAACTTTGTTTCAATCATTGGTACCCAGGGCAATAGCTGAAGGATGGCTTGATGCTTCATTTTTGAAACCCTCTGGTGAAGATGGGGATATCCCAGTTGAAGATGAAAAAGTGAGGAACTACAAGAAAGAGGCAGTAACTATAATTCATGAGTATTTTCTCTCTGATGATATTCCTGAACTCATTAGGAATCTTGAAGATCTTGGAGCACCTGAGTTTAACCCAATATTTTTGAAGAAGCTAATTACTCTTGCTATGGACAGAAAAAACAGAGAAAAGGAAATGGCATCAGTACTACTATCTGCTCTTCATATAGAGATATTCTCCACAGAGGATATAGTTAATGGTTTTGTCATGCTTCTGGAAAGTGCTGAAGATACTGCACTGGATATATTGGATGCTTCAAATGAACTTGCCCTGTTTTTAGCTCGGGCTGTGATCGATGATGTATTGGCCCCTCTGAATTTAGAAGAAATTGGCAGCAGGTTACCACCTAAATGCAGTGGTAGTGAAACTGTGCGTATGGCTCGATCACTCATTGCAGCTCGTCATGCTGGTGAGAGGCTATTGAGATGTTGGGGTGGGGGTACTGGATGGGCTGTGGAGGATGCCAAGGACAAGATCATGAAGTTGTTGGAGGAGTATGAAAGTGGGGGTGTGGTGAGTGAAGCATGCCAGTGTATTCGTGATCTTGGAATGCCTTTCTTTAACCATGAGGTTGTGAAGAAAGCTTTGGTCATGGCTATGGAGAAGAAGAATGATAGGATGCTGGATCTGCTGCAGGAGTGCTTCAGTGAAGGTCTCATCACTATCAATCAGATGACTAAAGGCTTCACCCGCATCAAGGACGGTCTCGAGGATCTGGCTCTCGACATTCCAAATGCACGTGAGAAATTTGCCTTCTATGTGGAGCATGCAAACAACAAGGGTTGGCTTTTACCTTCATTTGATTCTCCAGCTGCCTGA 2352 0.443 MDQIQDQELARSLGSSSLVFLRVERKGRYLCWTRKDRFCKSNCFSCLGSRSGPSTEESDSDLHLTIFNRSQIIICCEGFLTDEQREMLKIASNNVENLSSSPKSPTSFVADHHIKAPAGSKAQTAGIAVRHVRRSHSGKLVRVKKDKLDAFLILNVDGAGGKGTWGKLLDTDGESHIDRKDPNYDSGEEPYQLVGSTVTDPLDEFKKAVVSTIEEYFSTSDVELAASDLRELGSSEYYPYFIKRLVSMAMDRHDKEKEMASVLLSALYADVISPAQIRDGFFLLLESADDLAVDILDAVDVLALFLARAVVDDILPPAFLARARKALPESSKGFQVIRTAEKSYLSAPHHAELVERRWGGTTHITVEEVKKKISDLLREYVESGDTVEACRCIRELGVSFFHHEVVKRALVLAMEIRSAESLMLKLLKEAAEEGLISSSQMVKGFSRLAEGLDDLALDIPSAKTLFQSLVPRAIAEGWLDASFLKPSGEDGDIPVEDEKVRNYKKEAVTIIHEYFLSDDIPELIRNLEDLGAPEFNPIFLKKLITLAMDRKNREKEMASVLLSALHIEIFSTEDIVNGFVMLLESAEDTALDILDASNELALFLARAVIDDVLAPLNLEEIGSRLPPKCSGSETVRMARSLIAARHAGERLLRCWGGGTGWAVEDAKDKIMKLLEEYESGGVVSEACQCIRDLGMPFFNHEVVKKALVMAMEKKNDRMLDLLQECFSEGLITINQMTKGFTRIKDGLEDLALDIPNAREKFAFYVEHANNKGWLLPSFDSPAA 783
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g0295 783 FunFam programmed cell death protein 4 196 347 - -
Lele23g0295 783 FunFam Programmed cell death protein 4 354 489 - -
Lele23g0295 783 ProSiteProfiles MI domain profile. 665 783 IPR003891 -
Lele23g0295 783 SUPERFAMILY ARM repeat 662 778 IPR016024 -
Lele23g0295 783 SUPERFAMILY ARM repeat 500 658 IPR016024 -
Lele23g0295 783 ProSiteProfiles MI domain profile. 368 489 IPR003891 -
Lele23g0295 783 ProSiteProfiles MI domain profile. 204 325 IPR003891 -
Lele23g0295 783 FunFam programmed cell death protein 4 492 646 - -
Lele23g0295 783 SUPERFAMILY ARM repeat 202 361 IPR016024 -
Lele23g0295 783 Gene3D - 197 345 - -
Lele23g0295 783 Gene3D - 493 645 - -
Lele23g0295 783 SUPERFAMILY ARM repeat 365 486 IPR016024 -
Lele23g0295 783 PANTHER PROGRAMMED CELL DEATH 4 78 779 IPR039778 GO:0045892
Lele23g0295 783 Gene3D - 355 486 - -
Lele23g0295 783 Gene3D - 653 780 - -
Lele23g0295 783 Pfam MA3 domain 205 316 IPR003891 -
Lele23g0295 783 Pfam MA3 domain 369 480 IPR003891 -
Lele23g0295 783 Pfam MA3 domain 504 613 IPR003891 -
Lele23g0295 783 Pfam MA3 domain 667 774 IPR003891 -
Lele23g0295 783 SMART ma3_7 369 480 IPR003891 -
Lele23g0295 783 SMART ma3_7 666 775 IPR003891 -
Lele23g0295 783 SMART ma3_7 205 316 IPR003891 -
Lele23g0295 783 SMART ma3_7 503 614 IPR003891 -
Lele23g0295 783 ProSiteProfiles MI domain profile. 502 623 IPR003891 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g0295 Lele-ChrLele23 2023963 2029447 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g0295 669 765 Eukaryotic Initiation Factors Gene Family AT5G57870 31.000 1.73e-08 56.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele23g0295 23 2023963 2029447 Lele23g0295 23 2023963 2029447 ECH
Lele21g1715 21 25041332 25044218 Lele23g0295 23 2023963 2029447 hybridization
Lele22g1692 22 22382196 22385322 Lele23g0295 23 2023963 2029447 hybridization