Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g0286 ATGCCACTATCTCCTGCTTTTGCGTATGCACGCCCTCTCAAGCTTCTCTTCACTCCCACTCTCTTTCATCATCGTACAACCTCACGCTCTCTCTTAGCTCAATCCACCATTATCACCAGCTCTACTTTCCTCACGGGGAATTATCGGTCATCGAGGATGCAGCAATTCTGGTCTGGGAATAGCATTGGCAAGAACAAAGCAATGGTGGAGAATTTGCAACGCTATGGAGTAATATCATCGAAAAAGGTAGCTGAGGTTATGGAGAGTGTAGACAGAGCTTTGTTTGTTCCTGATGGTACTCCACCTTATGTTGACAGCCCAATGGCAATAGGCTACAATGCCACTATATCTGCACCTCATATGCATGCCATGTGCCTCCAGTTGCTGGAGCAGAATTTGCAGCCTGGGATGCGTGCTCTGGATGTTGGATCAGGGACTGGGTATCTTACAGCATGCTTTGCTTTGATGGTTGGACCCCAAGGTCGTGCTGTTGGCGTGGAGCATATTCCTGAATTAGTCTCTTCTTCATTGGAGAATATTCAGAAAAGTGCTGCAGCTCCACTGTTGAAAGATGGTTCCCTCTCGGTGCATGCTGGTGATGGAAGGAAAGGTTGGCCAGAGCATGCTCCGTACGATGCCATACATGTGGGAGCGGCGGCACAAGAAATCCCCCAACCACTCATAGATCAGTTGAAGCCCGGAGGTAGAATGGTGATTCCTGTTGGAAACGTATTTCAGTATCTAAAGGTAATTGACAAAAACTCCGATGGTTCTGTAAGCGTGCGGAGTGAGACTTCTGTTCGCTATGTGCCTCTCACAAGTCGAGATGCTCAACTACGAGGTTACTGA 849 0.4806 MPLSPAFAYARPLKLLFTPTLFHHRTTSRSLLAQSTIITSSTFLTGNYRSSRMQQFWSGNSIGKNKAMVENLQRYGVISSKKVAEVMESVDRALFVPDGTPPYVDSPMAIGYNATISAPHMHAMCLQLLEQNLQPGMRALDVGSGTGYLTACFALMVGPQGRAVGVEHIPELVSSSLENIQKSAAAPLLKDGSLSVHAGDGRKGWPEHAPYDAIHVGAAAQEIPQPLIDQLKPGGRMVIPVGNVFQYLKVIDKNSDGSVSVRSETSVRYVPLTSRDAQLRGY 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g0286 282 FunFam Protein-L-isoaspartate O-methyltransferase 56 282 - -
Lele23g0286 282 Pfam Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 64 276 - -
Lele23g0286 282 ProSitePatterns Protein-L-isoaspartate(D-aspartate) O-methyltransferase signature. 199 214 IPR000682 GO:0004719|GO:0036211
Lele23g0286 282 CDD AdoMet_MTases 138 241 - -
Lele23g0286 282 TIGRFAM pimt: protein-L-isoaspartate O-methyltransferase 64 278 IPR000682 GO:0004719|GO:0036211
Lele23g0286 282 Gene3D Vaccinia Virus protein VP39 58 282 IPR029063 -
Lele23g0286 282 PANTHER PROTEIN-L-ISOASPARTATE O-METHYLTRANSFERASE 54 279 IPR000682 GO:0004719|GO:0036211
Lele23g0286 282 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 65 253 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g0286 Lele-ChrLele23 1956125 1958717 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele23g0286 23 1956125 1958717 Lele17g1109 17 21400568 21403635 CCT
Lele23g0286 23 1956125 1958717 Lele18g0432 18 2545814 2547631 CCT
Lele23g0286 23 1956125 1958717 Lele19g0451 19 2596264 2599086 CCT
Lele23g0286 23 1956125 1958717 Lele20g1001 20 15954438 15957376 CCT
Lele23g0286 23 1956125 1958717 Lele23g0286 23 1956125 1958717 ECH
Lele21g1725 21 25109630 25112428 Lele23g0286 23 1956125 1958717 hybridization
Lele22g1700 22 22455403 22457833 Lele23g0286 23 1956125 1958717 hybridization