Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g0278 ATGGAGCGCGTATTTGAATTTCCTCATACTCACCTCGATCGTCGGCCGAGAAAGAGGGCGCGTTTAGGTTGGGACATCCCTGAGGCCCCGAAGGCTCAGGTAGGATTGTTTTGTGGACAAGATGTTGGAATTTTTTCGAGCTATGCACCTTCAAGGGGGCCTACAGAGCATACAAATAATTCTCTAAATGTTAAGGGAGTAGCTCGAAATGGTTCTCCCCCATGGCGAGATGATGACAAAGATGGGCATTACATGTTTGCGCTTGGAGAAAATTTAACTTCTCGCTATAAGATACACAGCAAAATGGGGGAAGGAACTTTTGGGCAAGTCTTGGAATGCTGGGACCGAGAACGGAAGGAGATGGTTGCAGTAAAAATTGTCCGTGCGATAAAAAAGTATAGAGAAGCTGCCATGATAGAGATTGACGTGCTGCAACAGTTTGTTAAACATGATAAAGGTGGCAGTCGTTGTGTACAAATACGGAACTGGTTTGACTATCGTAATCATATTTGTATTGTGTTTGAGAAACTTGGGCCAAGCTTATACGATTTTCTTCGGAAAAACAATTATCGCTCATTTCCCATTGATCTTGTTCGTGAGATTGGCAGGCAACTATTGGAATGTGTAGCATTCATGCATGATTTGCGCATGATCCATACGGACTTGAAGCCAGAGAACATACTACTAGTTTCACCAGACTACGTTAAAGTTCCTGACTACAGGAGCTCTTCCAGATCACCAAGTTCCTATTTGAAGAGAGTGCCAAAGTCAAGTGCTATCAAAGTTATTGATTTTGGTAGCACAACTTATGAGCGTGAGGATCAGACTTACATTGTATCAACACGGCATTATAGGGCACCCGAAGTTATACTTGGACTTGGATGGAGTTATCCATGTGACATATGGAGTGTGGGATGCATATTGATAGAGCTATGCACGGGCGAGGCTTTGTTTCAGACTCATGAGAATTTGGAGCACCTTGCAATGATGGAACGGGTGCTAGGCCCGTTGCCACAGCACATGTTGAAGAGAGTAGACCGAAATGCTGAGAAGTATGTTCGAAGGGGTAGACTAGATTGGCCAGAGGGGGCCGCCACTAGGGATAGTATTAAAGCTGTAATGAAGCTGCCTCGGCTTCAGAATCTGGTAATGCAGCATGTGGACCATTCAGCGGGAGATCTGATACACGTGTTGCAGGGTTTGCTTAGATATGACCCTTCTGAAAGACTAACAGCTAAGGAGGCTCTAAGACATCCCTTCTTTACAAGAGATCACCTTAAGAGATAG 1287 0.446 MERVFEFPHTHLDRRPRKRARLGWDIPEAPKAQVGLFCGQDVGIFSSYAPSRGPTEHTNNSLNVKGVARNGSPPWRDDDKDGHYMFALGENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAVKIVRAIKKYREAAMIEIDVLQQFVKHDKGGSRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNNYRSFPIDLVREIGRQLLECVAFMHDLRMIHTDLKPENILLVSPDYVKVPDYRSSSRSPSSYLKRVPKSSAIKVIDFGSTTYEREDQTYIVSTRHYRAPEVILGLGWSYPCDIWSVGCILIELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRNAEKYVRRGRLDWPEGAATRDSIKAVMKLPRLQNLVMQHVDHSAGDLIHVLQGLLRYDPSERLTAKEALRHPFFTRDHLKR 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g0278 428 SUPERFAMILY Protein kinase-like (PK-like) 83 425 IPR011009 -
Lele23g0278 428 Gene3D Phosphorylase Kinase; domain 1 83 176 - -
Lele23g0278 428 ProSitePatterns Serine/Threonine protein kinases active-site signature. 217 229 IPR008271 GO:0004672|GO:0006468
Lele23g0278 428 MobiDBLite consensus disorder prediction 52 74 - -
Lele23g0278 428 ProSiteProfiles Protein kinase domain profile. 96 421 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele23g0278 428 PANTHER SERINE/THREONINE-PROTEIN KINASE DOA-RELATED 2 424 - -
Lele23g0278 428 MobiDBLite consensus disorder prediction 52 67 - -
Lele23g0278 428 FunFam Serine/threonine-protein kinase AFC2 83 176 - -
Lele23g0278 428 FunFam Serine/threonine-protein kinase AFC2 172 421 - -
Lele23g0278 428 CDD PKc_CLK 83 421 - -
Lele23g0278 428 Pfam Protein kinase domain 96 421 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele23g0278 428 SMART serkin_6 96 421 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele23g0278 428 Gene3D Transferase(Phosphotransferase) domain 1 150 421 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g0278 Lele-ChrLele23 1920422 1923718 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g0278 101 421 Core Cell Cycle Gene Families AT1G76540 25.602 1.21e-27 110
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CLK Lele23g0278 Pkinase 6.4e-50 CL0016