Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g0259 ATGCGTAATGGTCGTAACGTTCGAGCTTGGATAGATTTTGATGGCACAAATTTGGAGATAAATGTTATGGTTGCGCCAATTGGCGTTGCTCGCCCATCTATGTCGACGCTTTCGTATAAAGATCCTGTTATAGCTAATTACCCTGAATCGTCGTCTTCGAAGCTTTCAGGAGGGGCAATTGCCGGGATTGTTATCGGATGCCTTGCTTTTCTGGTGATTTGTGGTTCTGGGTTTTACCTGTGGTGGCGAAACAAGAAATTAAAAGAGCAAGAGGACGAAATTGAAGATTGGGAGCTAGAGTATTGGCCACACAGATTCTCATACGAGGAGCTCAGCATGGCTACTGATGAATTCCACGAGGATAATCTTCTAGGTTCAAGAGGATTCAGAAGAGTCTACAAAGGAACACCATCGAACAACACAGAAATTGCAGTCAAATGCGTCAACCACGATTCCAAGCAGGGATTACGCGAATTTATGGCGGAGATCTCCAGCATGGGCAGGCTTCAGCACAAGAATTTGGTTGCGTGTGGGCGGAGACCGATAGAGACGTCGGCGCCGGAGGAGGAGGTAGTGCTGATTGATTGGGTGAGGGATTTGTACACGAAAGGGAGTGCAATCGAGGCGGCTGATGCGAGGATTAAGGGTGAGTACGATGAAGGAGACATGGAGATGATTTTGAAGCTTGGTTTAGCTTGTTGTCACCCTGATCCGCAGAGGCGGCCGACCATGAAGGAGGTCGTTGTGCTTTTGGTGGGCGAGGAACTCTCGGCGGCGCCGGTGGAATCGTTATCTGAGTTAGCTAGCGGTGAGAGCGGTACAGTGAATTGCGACGGCGACTGTGAATCACAATAG 855 0.4901 MRNGRNVRAWIDFDGTNLEINVMVAPIGVARPSMSTLSYKDPVIANYPESSSSKLSGGAIAGIVIGCLAFLVICGSGFYLWWRNKKLKEQEDEIEDWELEYWPHRFSYEELSMATDEFHEDNLLGSRGFRRVYKGTPSNNTEIAVKCVNHDSKQGLREFMAEISSMGRLQHKNLVACGRRPIETSAPEEEVVLIDWVRDLYTKGSAIEAADARIKGEYDEGDMEMILKLGLACCHPDPQRRPTMKEVVVLLVGEELSAAPVESLSELASGESGTVNCDGDCESQ 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g0259 284 Pfam Protein tyrosine and serine/threonine kinase 121 177 IPR001245 GO:0004672|GO:0006468
Lele23g0259 284 SUPERFAMILY Protein kinase-like (PK-like) 176 249 IPR011009 -
Lele23g0259 284 SUPERFAMILY Concanavalin A-like lectins/glucanases 2 168 IPR013320 -
Lele23g0259 284 Gene3D Phosphorylase Kinase; domain 1 99 176 - -
Lele23g0259 284 SUPERFAMILY Protein kinase-like (PK-like) 94 176 IPR011009 -
Lele23g0259 284 CDD TM_EGFR-like 56 90 - -
Lele23g0259 284 PANTHER - 4 175 - -
Lele23g0259 284 Gene3D Transferase(Phosphotransferase) domain 1 177 262 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g0259 Lele-ChrLele23 1785404 1787196 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g0259 175 253 Receptor kinase-like Gene Family AT1G15530 57.500 1.18e-23 98.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Lele23g0259 PK_Tyr_Ser-Thr 1.5e-05 CL0016