Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g0250 ATGGCGTCGTCATCATCAAGCTCTTACAATTCACCATGTGCTGCCTGCAAATTCTTGAGGAGAAAATGCTTGCCAGGTTGCATATTCGCGCCTTATTTTCCACCGGAAGAGCCTCAGAAATTCGCCAACGTCCACAAGATATTTGGAGCCAGTAACGTCACTAAGCTCCTCAACGAGCTCCTTCCTCACCAGCGAGACGACGCCGTCAGCTCACTCGCCTACGAAGCGGAGGCTCGCGTCAGAGACCCCGTCTACGGCTGCGTCGGCGCCATCTCCTTCCTCCAGAGACAGGTCCAGAGGCTTCAGAAGGAGCTTGACGCCGCTAATGCCGATCTGCTCCGTTATGCCTTCAACGACATAGCGCCGTCGTCGTCGCAGCCTGGATTGTCCTCTTCAGTTCAACCCTGTGTTGTGCCTCAACGACGAAGCCCTATGGACTTTGGAGATGGTGCTTATTCTCTTCCTTGGGCCGATTCTTCTTCGGAGGACATCAATAATGGAGGAGGAGGAGGTAATTTGTGA 522 0.5364 MASSSSSSYNSPCAACKFLRRKCLPGCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLPHQRDDAVSSLAYEAEARVRDPVYGCVGAISFLQRQVQRLQKELDAANADLLRYAFNDIAPSSSQPGLSSSVQPCVVPQRRSPMDFGDGAYSLPWADSSSEDINNGGGGGNL 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g0250 173 MobiDBLite consensus disorder prediction 149 173 - -
Lele23g0250 173 Pfam Lateral organ boundaries (LOB) domain 12 109 IPR004883 -
Lele23g0250 173 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 10 125 - -
Lele23g0250 173 MobiDBLite consensus disorder prediction 158 173 - -
Lele23g0250 173 ProSiteProfiles LOB domain profile. 11 112 IPR004883 -
Lele23g0250 173 Coils Coil 91 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g0250 Lele-ChrLele23 1732480 1733001 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g0250 3 170 AS2 family AT5G63090 67.857 2.28e-75 222
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lele23g0250 LOB 6.9e-42 No_clan