Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g0242 ATGCCTGAAAATCCATGGACGACCCTCTTCTTCCTAGTAACCGCACTTTTACTTCATTCCCAATATCCTTTTATTGCTTCTTCTGCTGCTGTTAACCCACAAGGGCAAGCTCTTCTTTCATGGAAGACAACATCCCTGAACGGGTCCTTGGAGGTTCTGAGTGATTGGGACCCGATTGACGAAACTCCATGTGGCTGGTTTGGAGTTAGCTGCAACTTGAAGAACGAGGTTGTGCAATTAGATCTGAGGTATGTTGATTTGCTTGGAAGCGCTCCTTCCAATTTCACCTCATTGAGTTCCTTGACCAAGCTTATCCTTATTGGAACGAACCTCACTGGTTCTATCCCAAAAGAGATAGGCTTTCTTAGCAATCTCACCTACTTGGACTTGAGTGACAATGCCTTGACTGGTGAGATCCCAAGTGAGCTTTGCTTTTTGCCTCAGCTTCAAGAACTTCATCTCAACTCAAACCAGCTTGAAGGGTCGATTCCAATTGCAATTGGGAATCTCACAAAGTTGGAGTGGCTGATCTTATATGATAATCAGCTAAGTGGTGAAATTCCAACCACGATAGGAAATCTGAAGAATCTGCAAGTGATTCGAGCTGGGGGAAACAAGAACCTTGAAGGTGCTTTGCCTCATGAAATAGGGAACTGTACAAAATTGGTCATGTTGGGTTTAGCTGAAACAAGTATCTCGGGATTTCTTCCTCCAACTCTTGGCCTACTCAAGAAGCTGAACAGTATTGCAATTTATACTTCCCTCCTCTCTGGCCAGATTCCTCCTGAACTCGGTGACTGCACTGAACTTGAGAACATTTATTTGTACGAGAATTCCCTAACTGGATCATTACCTAGCAGATTGGGAAATCTTAGGAATCTCAAGAATCTTCTTTTATGGCAGAACAATTTAGTTGGCACCATCCCACCAGAAATTGGAAATTGCTACCAGTTATCTGTCATTGACATCTCAATGAACTCGCTTACAGGAAGCATTCCCAAGAGTTTTGGAAATCTGACGGCTTTGGAAGAACTTCAGCTTACCGAAAACCAGATTTCAGGGGAGATTCCTGCAGAGCTAGGGAACTGCGAGCAACTCACTCACATCGAGCTGGACAACAATCAAATCACGGGGACGATACCTTCTGAATTCGGAAACCTCAGTAATCTGACGTTGTTGTTCCTGTGGAATAATAAGCTCGAAGGAAATATACCTTATTCACTTTCCAATTGCCAAAACCTCGAGGCTGTGGATCTGTCACAGAATGCACTTACTGGTCCCATACCGAAGGGGATATTCGAGCTCAGGAATCTCAACAAGCTCTTGCTACTTTCTAATAATCTCTACGGAAGTATTCCATCTGAAATTGGTAATTGTTCGTCTTTGATTCGGTTCCGAGTGAGCAAAAATAAGATCACAGGGAGCATACCCCCACAGATTGGAAATCTGAGAAACTTGAACTTTTTGGATCTTGGATACAATCGGATTTCCGGAGTTATTCCAGAAGAGATGTCAGGCTGCAGGAATCTCGCGTTTTTGGACCTACATTCCAATATGATCGCCGGGAGCTTGCCGGAGAGTCTGGGTGAGCTTGTTCCGCTTCAATTTATCGACTTCTCTGATAACATGATCGAAGGTACGCTGAGTCCGAGACTAGGATCGCTTGGTTCAATCACAAAATTGATTCTCGGAAAGAATCATATCTCTGGATCAATTCCGAGTCAACTCGGTTCCTGTTCGAAGCTTCAGTTGCTGGATCTTAGTAGCAACAATTTCTCCGGCAATATCCCCGGTAGTCTTGGTAATATTCCGGCGCTTGAAATTGCACTGAATCTGAGCTTGAATAAACTTTCCGGCGAGATTCCTCAGGAGTTTTCAGCCTTGGTTAAGCTGGGGATCTTAGACATTTCCCACAACGAGCTTATCGGCAACCTTCGTTATCTCGCGGACCTCCAAAATCTCGTCGTCCTCAATATCTCGTACAACAAATTCTCCGGGCGCATCCCGGACACGCCTTTCTTCGCAAAGCTTCCTTTAAATATGCTCGCCGGCATCCCATCGCTCTGCCTCTCCGTAAACCGATGCGCCGAAGACGATTCTGGAAGCCGTTCAGGAAGGCGTGCGAAGACGGCGCGTATAGCTATGGTGGTCCTACTTTGCACTGCATGTGCTCTGCTCTTGGCGGCGCTGTACGTCGTCTTCGTGGCAAAACTGCGACAGAGGGGCCACGGTAACGATCTCGACCTCGACGGGAGGGGTAGCGACCTAGAGATGGGCCCACCATGGGAGGTGACAGTGTACCAGAAGCTGGACCTGTCAACTTCCGACGTGGCAAAGTGTCTCACCGCTGGAAACGTCATCGGGCGGGGACGATCCGGGGTGGTTTACAGAGTGAACCTGCCAGTGGGAATAGAAATGGCTGTGAAGAGGCTCCGGTCGTCCGAGAAATTCTCGGCGGCAGCGTTTTCGTCGGAGAGAACGACACTGGCGAGAATACGACACCGTAACATAGTGAGGCTATTGGGTTGGGCGGCGAACCAGAAGGCGAAGTTACTGTTTTATGATTATTTACCAAACGGTAATCTGGATACGCTTTTACACGAAGGGTGCACAGGATTGATCGAGTGGGAGACACGGTTCAAGATAGCGCTGGGCGTGGCGGAAGGCTTAGCGTACCTACATCATGACTGTGTGCCTGCCATCTTGCACCGGGATGTAAAAGCGCACAACATTTTGTTAGGAGACAGGTACGAGCCGTGTCTCGCAGATTTTGGTTTTGCTAGATTTGTACACGAAGACCAAGCTTCCTTCTCCGTTAATCCTCAATTCGCTGGTTCTTACGGCTACATTGCGCCGGAGTATGGGTGCATGTTGAAGATAACAGAGAAGAGCGACGTGTATAGCTACGGAGTGCTACTGTTAGAGATAATCACAGGGAAACGACCCGTGGACGCGTCGTTCGGTGAGGGGCTACATGTGATAGATTGGGTGAGAGATCATCTGAAGAAGAAGAAGGACCCTGTGGAGATTGTTGATCCCAAGCTTCAAGGCCACACAGACACACACATCCAAGAGATGCTTCAAGCACTCGGTATCTCCCTCCTCTGTACCAGCACTCGCCCCGTTGACCGTCCCAACATGAAAGACGTCGCCGCCTTGCTCAGAGAAATCCGCCACGACCCTCCCGCCGGTCACGACGCCCACAAGCCCACCACCAGCAACAACTCTTCTTCTTCCTCCTCTGTCACTCCCGCTCAGTTGTTGCTTCTTGATCATCCTTCGTCTCATTCTTCGTCGCTTGCTTATTCGTCTTCTACTGTACAAGGAAGGAGTGCGTGA 3339 0.4807 MPENPWTTLFFLVTALLLHSQYPFIASSAAVNPQGQALLSWKTTSLNGSLEVLSDWDPIDETPCGWFGVSCNLKNEVVQLDLRYVDLLGSAPSNFTSLSSLTKLILIGTNLTGSIPKEIGFLSNLTYLDLSDNALTGEIPSELCFLPQLQELHLNSNQLEGSIPIAIGNLTKLEWLILYDNQLSGEIPTTIGNLKNLQVIRAGGNKNLEGALPHEIGNCTKLVMLGLAETSISGFLPPTLGLLKKLNSIAIYTSLLSGQIPPELGDCTELENIYLYENSLTGSLPSRLGNLRNLKNLLLWQNNLVGTIPPEIGNCYQLSVIDISMNSLTGSIPKSFGNLTALEELQLTENQISGEIPAELGNCEQLTHIELDNNQITGTIPSEFGNLSNLTLLFLWNNKLEGNIPYSLSNCQNLEAVDLSQNALTGPIPKGIFELRNLNKLLLLSNNLYGSIPSEIGNCSSLIRFRVSKNKITGSIPPQIGNLRNLNFLDLGYNRISGVIPEEMSGCRNLAFLDLHSNMIAGSLPESLGELVPLQFIDFSDNMIEGTLSPRLGSLGSITKLILGKNHISGSIPSQLGSCSKLQLLDLSSNNFSGNIPGSLGNIPALEIALNLSLNKLSGEIPQEFSALVKLGILDISHNELIGNLRYLADLQNLVVLNISYNKFSGRIPDTPFFAKLPLNMLAGIPSLCLSVNRCAEDDSGSRSGRRAKTARIAMVVLLCTACALLLAALYVVFVAKLRQRGHGNDLDLDGRGSDLEMGPPWEVTVYQKLDLSTSDVAKCLTAGNVIGRGRSGVVYRVNLPVGIEMAVKRLRSSEKFSAAAFSSERTTLARIRHRNIVRLLGWAANQKAKLLFYDYLPNGNLDTLLHEGCTGLIEWETRFKIALGVAEGLAYLHHDCVPAILHRDVKAHNILLGDRYEPCLADFGFARFVHEDQASFSVNPQFAGSYGYIAPEYGCMLKITEKSDVYSYGVLLLEIITGKRPVDASFGEGLHVIDWVRDHLKKKKDPVEIVDPKLQGHTDTHIQEMLQALGISLLCTSTRPVDRPNMKDVAALLREIRHDPPAGHDAHKPTTSNNSSSSSSVTPAQLLLLDHPSSHSSSLAYSSSTVQGRSA 1112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g0242 1112 Gene3D Ribonuclease Inhibitor 31 187 IPR032675 -
Lele23g0242 1112 Pfam Leucine rich repeat N-terminal domain 32 72 IPR013210 -
Lele23g0242 1112 MobiDBLite consensus disorder prediction 1068 1112 - -
Lele23g0242 1112 Gene3D Ribonuclease Inhibitor 434 702 IPR032675 -
Lele23g0242 1112 Pfam Leucine Rich repeat 123 139 IPR001611 GO:0005515
Lele23g0242 1112 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 525 613 - -
Lele23g0242 1112 ProSitePatterns Protein kinases ATP-binding region signature. 787 809 IPR017441 GO:0005524
Lele23g0242 1112 SMART serkin_6 781 1063 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele23g0242 1112 ProSiteProfiles Protein kinase domain profile. 781 1054 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele23g0242 1112 Gene3D Ribonuclease Inhibitor 365 433 IPR032675 -
Lele23g0242 1112 MobiDBLite consensus disorder prediction 1060 1112 - -
Lele23g0242 1112 SUPERFAMILY Protein kinase-like (PK-like) 773 1056 IPR011009 -
Lele23g0242 1112 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 857 1072 - -
Lele23g0242 1112 Gene3D Ribonuclease Inhibitor 188 286 IPR032675 -
Lele23g0242 1112 SMART LRR_typ_2 146 169 IPR003591 -
Lele23g0242 1112 SMART LRR_typ_2 435 459 IPR003591 -
Lele23g0242 1112 SMART LRR_typ_2 651 684 IPR003591 -
Lele23g0242 1112 SMART LRR_typ_2 122 144 IPR003591 -
Lele23g0242 1112 SMART LRR_typ_2 339 363 IPR003591 -
Lele23g0242 1112 SMART LRR_typ_2 555 579 IPR003591 -
Lele23g0242 1112 SMART LRR_typ_2 387 411 IPR003591 -
Lele23g0242 1112 SMART LRR_typ_2 170 194 IPR003591 -
Lele23g0242 1112 SMART LRR_typ_2 291 315 IPR003591 -
Lele23g0242 1112 SMART LRR_typ_2 483 507 IPR003591 -
Lele23g0242 1112 Pfam Leucine rich repeat 147 206 IPR001611 GO:0005515
Lele23g0242 1112 Pfam Leucine rich repeat 317 376 IPR001611 GO:0005515
Lele23g0242 1112 Pfam Leucine rich repeat 464 520 IPR001611 GO:0005515
Lele23g0242 1112 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 31 205 - -
Lele23g0242 1112 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 534 1053 - -
Lele23g0242 1112 ProSiteProfiles Leucine-rich repeat profile. 124 147 IPR001611 GO:0005515
Lele23g0242 1112 Gene3D Phosphorylase Kinase; domain 1 766 856 - -
Lele23g0242 1112 Gene3D Ribonuclease Inhibitor 287 364 IPR032675 -
Lele23g0242 1112 Gene3D Transferase(Phosphotransferase) domain 1 857 1077 - -
Lele23g0242 1112 SUPERFAMILY RNI-like 80 401 - -
Lele23g0242 1112 Pfam Protein kinase domain 784 1035 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele23g0242 1112 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 430 524 - -
Lele23g0242 1112 ProSitePatterns Serine/Threonine protein kinases active-site signature. 901 913 IPR008271 GO:0004672|GO:0006468
Lele23g0242 1112 FunFam Putative LRR receptor-like serine/threonine-protein kinase 614 694 - -
Lele23g0242 1112 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 206 429 - -
Lele23g0242 1112 SUPERFAMILY RNI-like 331 670 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g0242 Lele-ChrLele23 1653401 1657660 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g0242 30 1059 Receptor kinase-like Gene Family AT5G56040 54.572 0.0 1088
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lele23g0242 Pkinase 1.1e-39 CL0016