Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g0215 ATGAGGAATTTTTGCTGGTCTAAACAAGTTCCGCTCAACCAGAAACTTGGGAGAAGGCTTTCGCTTGGCGAATACAAGCGAGCCGTGTCGTGGTCCAAGTATCTGGTCTCCTCTGGGGCTGCAATAAAGGAGGATGGAGAAGAGGATTGGAGCGCCGATTTGTCCAGGTTGCTCATTGGCGCCAAATTTGCCATTGGCAGTCATAGTAGGATCTATAAAGGTGTTTACAAGAACACCGAAGTGGCAATTAAGTTGATAAGTCTACCGGAGGAGGACGAAGACTTGGCTTCTTTGCTTGAGAGGCAGTTTAATTCTGAGGTTGCCATGCTCTTTCGATTGCACCATCCGAATATCATAAAGTTTGTTGCCGCTTGCAAGAAATCTCCTGTCTTCTGCATAATTACTGAATATATGCCAGGAGGATCATTGAGAAGATACCTGCGTAACCACAATCCCTATTCACTCCCACCCAAACTTGTTCTGAAATTATCCCTAGACATTGCACGGGGTATGCAATATCTTCATTCTCAGGGGATACTCCATAGGGATCTCAAATCAGAAAACCTTCTGCTGGGAGGAGATATGCGTGTAAAAGTAGCGGACTTTGGAATCTCATGCCAAGAATCTGAGAGCTTTACTACTAATGAATTCACTGGAACTTATCGTTGGATGGCACCTGAAATGTTGAGAGATAAGAATCATACCAAGAAAGCAGATGTCTACAGTTTTGGCATAGTTCTATGGGAGCTTTTAACAGCATTGACACCATATGAGAACATGACACCAGAGCAGGCAGCATTTGCAGCCTCCCAAAAGAATGTGAGGCCACCATTGCCACCTGAATGTCCATTGGCATTTAGTTGTCTGGTCACCAGATGCTGGGCAGCCAATCCAAACAAACGGCCACACTTCGATGAGATAGTGTCCATCTTGGAGGGCTATTCAGAATCCCTCAAGGAGGATGCAGATTTCTTCTCTAACTTCATACCACCGCCTCCTAATACTAATATCATTAAGGAATACTTATCACAGTGCATTTCTGGTCGTAAATTTGCTTTGTGAGAAGAAAAACAGCTGTATCCTTCCTCAATTATTGATGAGCTGATGGCTATGGCCGGACATAGCCCTCTGGCTCTCATCTTCATGGTGAATTCATTGGTGATTCTAAAGACTTTCTGCTTCTTATCGGTTGTCCCAGCCCGGTAA 1206 0.4453 MRNFCWSKQVPLNQKLGRRLSLGEYKRAVSWSKYLVSSGAAIKEDGEEDWSADLSRLLIGAKFAIGSHSRIYKGVYKNTEVAIKLISLPEEDEDLASLLERQFNSEVAMLFRLHHPNIIKFVAACKKSPVFCIITEYMPGGSLRRYLRNHNPYSLPPKLVLKLSLDIARGMQYLHSQGILHRDLKSENLLLGGDMRVKVADFGISCQESESFTTNEFTGTYRWMAPEMLRDKNHTKKADVYSFGIVLWELLTALTPYENMTPEQAAFAASQKNVRPPLPPECPLAFSCLVTRCWAANPNKRPHFDEIVSILEGYSESLKEDADFFSNFIPPPPNTNIIKEYLSQCISGRKFALXEEKQLYPSSIIDELMAMAGHSPLALIFMVNSLVILKTFCFLSVVPAR 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g0215 401 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 53 318 - -
Lele23g0215 401 Gene3D Phosphorylase Kinase; domain 1 47 138 - -
Lele23g0215 401 SUPERFAMILY Protein kinase-like (PK-like) 47 311 IPR011009 -
Lele23g0215 401 CDD STKc_MAP3K-like 64 311 - -
Lele23g0215 401 Gene3D Transferase(Phosphotransferase) domain 1 139 344 - -
Lele23g0215 401 ProSiteProfiles Protein kinase domain profile. 57 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele23g0215 401 SMART serkin_6 57 310 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele23g0215 401 FunFam Serine/threonine-protein kinase isoform 1 47 139 - -
Lele23g0215 401 ProSitePatterns Serine/Threonine protein kinases active-site signature. 179 191 IPR008271 GO:0004672|GO:0006468
Lele23g0215 401 PRINTS Tyrosine kinase catalytic domain signature 173 191 IPR001245 GO:0004672|GO:0006468
Lele23g0215 401 PRINTS Tyrosine kinase catalytic domain signature 219 229 IPR001245 GO:0004672|GO:0006468
Lele23g0215 401 PRINTS Tyrosine kinase catalytic domain signature 135 148 IPR001245 GO:0004672|GO:0006468
Lele23g0215 401 PRINTS Tyrosine kinase catalytic domain signature 238 260 IPR001245 GO:0004672|GO:0006468
Lele23g0215 401 PRINTS Tyrosine kinase catalytic domain signature 282 304 IPR001245 GO:0004672|GO:0006468
Lele23g0215 401 Pfam Protein tyrosine and serine/threonine kinase 61 311 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g0215 Lele-ChrLele23 1439609 1449529 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g0215 30 320 MAP Kinase Kinase Kinase AT1G62400 59.184 9.24e-126 367
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Lele23g0215 PK_Tyr_Ser-Thr 9.8e-65 CL0016