Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g0213 ATGAGCATGTTATCTCCCAATGACACTCGCCAAATTTTCCGTCATATATCACTACCGTCCCCTCCGGTGCCGGCGATAGCTCTCCACGATTTCTCCAGGCACATCCCCCTTCGTCGCCGCCACCTCCTCACTGCACTTACCCTCTCCTTCAACTTCATTGCGCCCTTCACAACTTCACTGCCCATTGCAGAGCCGGTCGCCGCCGCACGCGGTCTCTTCCAGATGCCCCCATTTCGTCTCAGCAATCGGTATTTTCTGGTGAGGGCCGGAGAGTCTCAATTCGAAAACATGGGAGTGATCAACACGAACCCGGTGGCCAAGACTTCCGTCGATAGTGGATTGTCTGAAAGAGGGAAGAAGCAGGCGGTGAGAGCTGCTTTTGATCTCAAGGAAATGGGGGCTTGTGATAAGAGTTGCTGGATTTGGCCTGCCATTACTCAGAGAGCTTATCAGACTGCAGAAATTATTGCATCCGTTAATGGAGTTAGTAGAAGTTTTATAGTTCCAGAATACAGCTTTCTGGATGCCCGTGGGTTGGGTGCTTATGAAGGCAAAAACTTGGAATCCATATCAGAAATATATGAATTAGATAGTGTTTCTCCAAAAAGCAAACCACCTCCAGTGGATGATGGAACTCCAAATGAGAGTGTTAATGATGTTTTTGTTCGTGTAACACAACTCATGTCAATTCTTGAAACTCAGTACTCGGGTGATATTGTGGTTATAGTTTCCCCAGATTCTGACAATTTGACAATTCTTCAGGCTGGTTTGATAGGACTTGACTTGCGAAGGCACAGGGATCTGTCATTTGCGCCTGGTGAAGTCCGTTTTGTTGATGCGAAAAGCATTCCCACTTATAAGCAGCCTGCTTCTGCTGTATATAAATGTTTGAACCCCCCAAATTGTAACTAA 912 0.4682 MSMLSPNDTRQIFRHISLPSPPVPAIALHDFSRHIPLRRRHLLTALTLSFNFIAPFTTSLPIAEPVAAARGLFQMPPFRLSNRYFLVRAGESQFENMGVINTNPVAKTSVDSGLSERGKKQAVRAAFDLKEMGACDKSCWIWPAITQRAYQTAEIIASVNGVSRSFIVPEYSFLDARGLGAYEGKNLESISEIYELDSVSPKSKPPPVDDGTPNESVNDVFVRVTQLMSILETQYSGDIVVIVSPDSDNLTILQAGLIGLDLRRHRDLSFAPGEVRFVDAKSIPTYKQPASAVYKCLNPPNCN 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g0213 303 CDD HP_PGM_like 83 157 IPR013078 -
Lele23g0213 303 SUPERFAMILY Phosphoglycerate mutase-like 83 279 IPR029033 -
Lele23g0213 303 Gene3D - 79 288 IPR029033 -
Lele23g0213 303 Pfam Histidine phosphatase superfamily (branch 1) 85 278 IPR013078 -
Lele23g0213 303 PANTHER PHOSPHOGLYCERATE MUTASE FAMILY PROTEIN 32 303 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g0213 Lele-ChrLele23 1427161 1428873 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele23g0213 23 1427161 1428873 Lele17g1031 17 20960988 20970011 CCT
Lele23g0213 23 1427161 1428873 Lele18g0503 18 2985795 2989542 CCT
Lele23g0213 23 1427161 1428873 Lele19g0526 19 3045137 3053578 CCT
Lele23g0213 23 1427161 1428873 Lele20g0931 20 15541531 15544756 CCT
Lele23g0213 23 1427161 1428873 Lele23g0213 23 1427161 1428873 ECH
Lele21g1795 21 25607738 25610587 Lele23g0213 23 1427161 1428873 hybridization