Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g0198 ATGAGTATCCCAGCGGTAATGGTTGCTCAAATTGGCTTGGATTTGGGAAAATGCAAGGCTATGCATGGGCGTGGAGGAGAGGAGAGGAAAAGAACTCGGCACATGTGGACAAGCCCCACTCATGGCCAACCGATTGTAAGCGCCGCTCCCGATGTTTCTTCTTCATCTTCACCTTCAGCTAAAGCATTCTATAAGGACGGTCGCAAAATTAGTGTTGGTGACTGTGCCCTCTTCAAGCCACGTCAGAAGTGTCCACCTTTTATTGGGATAATTCGTTCACTGACAGTTGGCAAAGAGGGTAAACTGAAGATACTTGTTAATTGGCTTTATCGGTCAGCTGCAGTGAACCTTGGCAAAGGTCTTCTACTGGAGACTGCGCCAAACGAAGTTTTCTACTCCTTTCATAAGGATGAGATTCCTGATTCATCACTTCTGCATCCTTGTAAAGTTGCATTTCTTCCTAAAGGCGTTGAACTTCCATCAGGGACTTCGTCATTTGTGTGTAGGAGGGTTTATGACATTGCAAACAAGTGTTTATGGTGGTTAACTGACAAAGACTTTAGTAATGTACTTCAAGAAGAAGTAGATCAGCTATTGTATAGGAATCGCATAGAAATGCATGCTACAGTGCAACCAGGTGGTCGATCTCCAAAGCCAATGAGTAGTCCAACATCATCACAGTTAAAATCAGGTTCAGATGGTGTCCAGAATAGTGCTTCTTTTCCTTCTCAAGTTAAGGGAAGGAAAAGGGAGAGGGTAGATCAAGGGACAGAGTCCGCCAAGCGAGAACGTACAACAAAAGTTGAGGATGGGGACTCTGGCCATTCTAGACAGGAGAACATTTTAAAAGCAGAGATTGCAAAGATTACAGAAAAGGGGGGGCTTGTCAATGCTGAAGGGGTTGAGAGGCTTGTGCAGCTTATGGTTCCTGATAGGAATGTGAAAAAGATAGATTTGGCTAGCCGGTCAATGCTTGCTGCTGTTATTGCATTGACAGATAAATTGGATTGTCTTAGTCAGTTTGTGCAGCTGAAGGGTTTGCCAGTGTATGATGAATGGCTTCAAGAGGCCCATAAAGGGAAAATCGGTGATGGAAGTGGGTCTAAGGACAGTGATAAATCTGTTGAAGAATTTCTTTTGGTATTACTTCGGGCACTCGATAAGCTTCCTGTAAATCTTCAAGCTCTACAGACGTGTAACATAGGCAAATCTGTGAATCATTTGCGAACTCATAAAAACTCAGAAATCCAGAAGAAAGCTAGGGGATTAGTTGACACATGGAAGAAACGTGTTGAAGCTGAAATGAACATTAATGATGCAAAAGCTGGTTCTGGTCAAACTGTCCCCTGGCATACTAGAACGCGTCTCTCTGAAGTTGGCCAGAGTGGGAATAAAAATTCAGGTGGGTCATCTGATGTTGCTGTAAAGAGCTCGGTCACACAGCTTTCTGCATCCAGAACTTCCTCTGTGAAGATTACCCAAGGAGAGAATTCTGCCAGATCTATTTCTCCTGGGTCTATGAAGTCAGTGCCCTCACCAACCTCAGCACCTATAAACTCAAAAGATGGACAGCCCCGTGCTGCTGCTCTCAGTGGAGTTTCTGATCTCCCCATATCAAATGCAAGGGATGAGAAAAGTAGTAGTTCTAGTCAATCTCATAATAACAGTCAATCTTGTTCCAGTGACCATGCTAAAACTGGGGTTTTTTCAGGAAAGGAGGATGCTAGGAGCTCTACTGCTATGAGTGTTAATAAAATATCAGGCAGTTCTTCACGGCACCGAAAGTCTATTAATGGAATCTCAGGTGCAATTCCATCTGGAGTTCAAAGGGAGTCTGGTCGAAATTCCACTGTACACAAAAATTCATCTTCTGAAAAATTTTCACAATCTGGAGTAACCGAAAAGGTGCATGATGGGACTTCTCTTGAGGGAAGTACTCCCAAGCTGATTGTTAAGATTCCAAACCGAGGTCGAAGTCCTGCAGAAAGTGCAAGTGGAGGTTCTTTCGATGATCCTTCAATCATGAACAGTCGAGCTTCATCTCCTGTTTTTTCAGAGAAGAATGATCAGTATGATCATAGCTCAAAGGAAAAGATTGATTTTTATCGAGCTAATACTGGCGCAGATATTAATACTGAATCCTGGCAGAGTAATGATTTTAAAGACGTACTAACAGCTTCTGATGAAGGCAATGGATCACCTGCTGCTGTTACTGATGAAGAGCGCTGCAGGACTGTTGGCGATTCTAAGAAGATGGTGGAAGCATCAAAAGCTGCTTCATCATCATCGGGAAATGAAAATAAGGCAGTAAATGTTCAGGATGCTTCTTTTAGCTCCATAAATGCTTTGATAGATAGTTGTGTAAAGTATTCTGAAACTAATGCTTCTTTGTCTGCTATTGATGATGTCGGAATGAAGCTTCTTGCCAGTGTAGCGGCTGGAGAGATTTCCAAATCTGAATTGACAACCCCTGCTACATCGCCTGAAATAAACACCAATGCGGTTGAACAGTCATGTGCAGGTAATGCCATCGAGTGTGAAGGAAAGCTGGTTCAAAATGAATGTCACGCGAATAATGGCATTGATGAACACAAGAAGCAGGATACTGTATCTGGGGATTCATGTGCTAATAATGATAACGATTTGGGTTTTTTGGCATCTGAAGTGAAGGTTCCTGAGGAGCAAAATATGCATATTACTTCATCTAGTAAGGATTTGCAGCGGGTTATGGAAGCTTGTCCGGAAAGCAGAGAAAAATCAAGTGAAATTCCCGTTGCTGCCTCATTGTCTGGCTTTCCTGAAAGCACTGTGCAAGAAGCCAGAGGTAGTGAATGTAGCAAACAGCTCAAGGAAAACAAAAATGTTGGGAATGTTAATGCAGGTGGAGATCTTGATGTTAGAGTTAATGAGGTTGCAAGAGGAGTAGAGATGGATACTATAGACAAGTCGACGTCAAATCCCTCTGTGGAGGTTGATGTGAAGGTTGATGTTAGAGTTAACGAGGTTGCAAGAGGAGTAGAGATGGATACTATAGACAAGCCGACGTCAAATCCCTCTGTGGAGGTTGATGTGAAGGGTGATAATTGTACAATTGAGGAATTGAGTAGTGGTGGACAGACAGGTCAGAAGGTTCCTGTGGTTGTTATGCAGGACTCAGTGAAAGGAATAGATGAGAATGTGTTACATCCTTCTGATGATAGTGTTGGTAAGGCTGTAGAAGACCACAGTGAAAGAGACTGCAGAAAGATGGTTGATGCTCGAAGTCATGCAGGTCAGTCTGAAATGCAAAGAAAGGAGAGTGACAATGATGATGCTGTGACAACACCTGAGAACAGAAGTACAGCCGGTTTAGGTTCAGGTGACACTGGTCTTGCTTCTGAGCATGTGGAGGAGAATTCAGAAGCAAAAGAGGCTCATGATCAACACGCTGGACAGAATCTGCAGAGAGCTTCACCGAGCTTGCCTTCACAAGAAATGGAGCGGCATCCGGTCTCAAAAGAGTCTAAATTGACTGCCATGGAAACAGAGGAAGCTGAAGAGTGCACCTCTGCCACTACAGACGCTTCTTCCATGTCTGCAGCTGGTGTGTCTGATGTGGTGGATGCAAAAGTTGAGTTTGACTTAAATGAAGGCTTCAGTGCAGATGATGGAAAATCTGGAGAGTTCAATAGCATTCCTGTGCCTGGGGGTGCACCTGCCGTACGAGTGATCAGTCCAGTGCCATTTCCTGCTTCAACCGTGTCTAGTGGTATTACTGCTTCAATCACTGTGGCTGCAGCTGCAAAGGGGCCCTTTGTGCCACCTGAAGACCTGTTGAAAAGTAAAGGGGAGCTTGGGTGGAAGGGATCAGCTGCCACCAGTGCATTCCGGCCTGCTGAGCCCAGAAAAATTGTAGAAATGCCTCTTGGTACACCATCAGCAGCTCCTATATCTGATGCCACAGCTGGAAAGCAGAGTCGACAACTATTGGATATTGACTTAAATGTGCCTGATGAAAGGATGATTGATGATATAGCCTCTCAAGCTAGTTCTCGTCAGCCAACAGATGGAGTTTCCCCTGTTCGCTGCTCTGGAGGTCTTGGTCTTGACTTAAACCAAGTGGATGAAGTTTCTGATGTGGGCAATTGCTCCACAAGCAATGGTCATAAAATGGATGTACAATTTATGCAGGTGAAACCATCATCCAGTGCGCATCCAAATAGAGAGGCAAGTGCCCTTAGGGACTTTGATTTGAATGACGGACCTGCAGCTGATGAAGTCATCACGGAACCAATGTTGTTCGCTCACCAAGCCAGAAGCAGTGTACCATCACTGACCTCTGCATCTGGACCTAGAACGAGTAGTACTGAACTAGGGAGTTTCTCATCATGGTTTCCTTCCACTGGGAACACCTATTCAGCCGTCACAAGATCTTCAATTATGCCTGATAGAGGGGATCAGCCCTTTTCAATTGTTGCACCTAATAGGCCGCAAAGAATGCTAGGTCCTGCTACTGGTGGCAGTCCATTTTTACCTGATGTTTATAGGGGACCGGTGCTGTCATCTTCTGCAATGCCATATCCATCTGCACCATATCAGTATCCTGTCTTCCCTTTTAATTCCAGCTTTCCTCTTCCATCTTCATCATTTTCAGGCGGATCAACTACTTATGTAGATTCAGCATCTGGTGGAAGGCTTTTCTTTCCTACAGTAAATTCACAGTTAATCGGACCTGCCAGTACAGTTTCATCTCATTACACCACCAGGCCTTATGTCTTTAGCCTTCCTGATGCTAGTGGTGCTACGGATGGTAAGAAATGGAGTGGGCAGGGTCTAGACCTTAATGCTGGGCCTGGAGGTCCTGACGTGGAGGGCAGAGATGAAAGTGCAGTTCTTTTTCAAAGGCAACTTCCTGTTGCCAGTTCACAGGCCCTAGCTGAGGAGCAGGTGAGGATGTTCCAGCTGGCTGGTGGTGTTCTCAAGAGGAAGGAACCAGATGGTGGATGGGATAGCTACAAGCAATCCTCTTGGCAATAG 5016 0.4474 MSIPAVMVAQIGLDLGKCKAMHGRGGEERKRTRHMWTSPTHGQPIVSAAPDVSSSSSPSAKAFYKDGRKISVGDCALFKPRQKCPPFIGIIRSLTVGKEGKLKILVNWLYRSAAVNLGKGLLLETAPNEVFYSFHKDEIPDSSLLHPCKVAFLPKGVELPSGTSSFVCRRVYDIANKCLWWLTDKDFSNVLQEEVDQLLYRNRIEMHATVQPGGRSPKPMSSPTSSQLKSGSDGVQNSASFPSQVKGRKRERVDQGTESAKRERTTKVEDGDSGHSRQENILKAEIAKITEKGGLVNAEGVERLVQLMVPDRNVKKIDLASRSMLAAVIALTDKLDCLSQFVQLKGLPVYDEWLQEAHKGKIGDGSGSKDSDKSVEEFLLVLLRALDKLPVNLQALQTCNIGKSVNHLRTHKNSEIQKKARGLVDTWKKRVEAEMNINDAKAGSGQTVPWHTRTRLSEVGQSGNKNSGGSSDVAVKSSVTQLSASRTSSVKITQGENSARSISPGSMKSVPSPTSAPINSKDGQPRAAALSGVSDLPISNARDEKSSSSSQSHNNSQSCSSDHAKTGVFSGKEDARSSTAMSVNKISGSSSRHRKSINGISGAIPSGVQRESGRNSTVHKNSSSEKFSQSGVTEKVHDGTSLEGSTPKLIVKIPNRGRSPAESASGGSFDDPSIMNSRASSPVFSEKNDQYDHSSKEKIDFYRANTGADINTESWQSNDFKDVLTASDEGNGSPAAVTDEERCRTVGDSKKMVEASKAASSSSGNENKAVNVQDASFSSINALIDSCVKYSETNASLSAIDDVGMKLLASVAAGEISKSELTTPATSPEINTNAVEQSCAGNAIECEGKLVQNECHANNGIDEHKKQDTVSGDSCANNDNDLGFLASEVKVPEEQNMHITSSSKDLQRVMEACPESREKSSEIPVAASLSGFPESTVQEARGSECSKQLKENKNVGNVNAGGDLDVRVNEVARGVEMDTIDKSTSNPSVEVDVKVDVRVNEVARGVEMDTIDKPTSNPSVEVDVKGDNCTIEELSSGGQTGQKVPVVVMQDSVKGIDENVLHPSDDSVGKAVEDHSERDCRKMVDARSHAGQSEMQRKESDNDDAVTTPENRSTAGLGSGDTGLASEHVEENSEAKEAHDQHAGQNLQRASPSLPSQEMERHPVSKESKLTAMETEEAEECTSATTDASSMSAAGVSDVVDAKVEFDLNEGFSADDGKSGEFNSIPVPGGAPAVRVISPVPFPASTVSSGITASITVAAAAKGPFVPPEDLLKSKGELGWKGSAATSAFRPAEPRKIVEMPLGTPSAAPISDATAGKQSRQLLDIDLNVPDERMIDDIASQASSRQPTDGVSPVRCSGGLGLDLNQVDEVSDVGNCSTSNGHKMDVQFMQVKPSSSAHPNREASALRDFDLNDGPAADEVITEPMLFAHQARSSVPSLTSASGPRTSSTELGSFSSWFPSTGNTYSAVTRSSIMPDRGDQPFSIVAPNRPQRMLGPATGGSPFLPDVYRGPVLSSSAMPYPSAPYQYPVFPFNSSFPLPSSSFSGGSTTYVDSASGGRLFFPTVNSQLIGPASTVSSHYTTRPYVFSLPDASGATDGKKWSGQGLDLNAGPGGPDVEGRDESAVLFQRQLPVASSQALAEEQVRMFQLAGGVLKRKEPDGGWDSYKQSSWQ 1671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g0198 1671 MobiDBLite consensus disorder prediction 669 688 - -
Lele23g0198 1671 MobiDBLite consensus disorder prediction 1058 1106 - -
Lele23g0198 1671 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 298 435 IPR035441 -
Lele23g0198 1671 CDD TFIIS_I 356 432 - -
Lele23g0198 1671 SMART TFS2_5 354 433 IPR003617 GO:0005634
Lele23g0198 1671 Pfam TFIIS helical bundle-like domain 382 431 IPR017923 -
Lele23g0198 1671 MobiDBLite consensus disorder prediction 37 53 - -
Lele23g0198 1671 MobiDBLite consensus disorder prediction 1127 1143 - -
Lele23g0198 1671 MobiDBLite consensus disorder prediction 457 521 - -
Lele23g0198 1671 ProSiteProfiles TFIIS N-terminal domain profile. 348 434 IPR017923 -
Lele23g0198 1671 MobiDBLite consensus disorder prediction 572 640 - -
Lele23g0198 1671 MobiDBLite consensus disorder prediction 24 53 - -
Lele23g0198 1671 SMART BAH_4 68 183 IPR001025 GO:0003682
Lele23g0198 1671 ProSiteProfiles BAH domain profile. 68 183 IPR001025 GO:0003682
Lele23g0198 1671 MobiDBLite consensus disorder prediction 747 767 - -
Lele23g0198 1671 MobiDBLite consensus disorder prediction 540 565 - -
Lele23g0198 1671 MobiDBLite consensus disorder prediction 245 279 - -
Lele23g0198 1671 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 336 445 IPR035441 -
Lele23g0198 1671 MobiDBLite consensus disorder prediction 457 694 - -
Lele23g0198 1671 Gene3D - 54 297 IPR043151 -
Lele23g0198 1671 MobiDBLite consensus disorder prediction 215 244 - -
Lele23g0198 1671 MobiDBLite consensus disorder prediction 1160 1176 - -
Lele23g0198 1671 MobiDBLite consensus disorder prediction 1057 1189 - -
Lele23g0198 1671 PANTHER BAH AND TFIIS DOMAIN-CONTAINING PROTEIN-RELATED 21 1671 - -
Lele23g0198 1671 MobiDBLite consensus disorder prediction 209 279 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g0198 Lele-ChrLele23 1306604 1315053 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR IWS1 Lele23g0198 Med26 1.2e-11 No_clan