Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g0193 ATGTCACAGAAGAGACGCCCCGAAGATGGCAAGGCTAAATCAGAGAGTAGCAGTTCGGAGGATAAGCGCAGAAAGGTTCCCGCCTTTTCCAGTGTGGTGCAAGAGGTGATCAAATTTAACTCTGTCCGGAATTTGCTGGAGCCAATTCTAGAGCCCTTGCTTCGACGAGTGGTTAAGGAAGAAGTTGAATCGGCCCTCAAGAGGCATTTAATGAGCATGAAACAGGTCTGTGAGAAGGAGGTTGTTACTCCTGAATCAAGAAATTTGCTGCTGCAGTTTGAAAACAATATCTCTACTCCCATCTTTACAGGTGCTCCAATTGAAGGGGAAGATGGCTCCAATTTACGGATAAGTTTAATTGATTCCCTGACGGGACAGGTTGTTAGTTCAGGACCTGAATCTACAGCTAAGGTGGAAATTTTAGTACTTGAGGGTGATTTTGAAGACAGAAGTGACATTTGGACGCCTGAAGAGTTTAGGAGCAACATTGTAAGAGAGAGAGATGGAAAAAAGCCTCTTCTCATGGGAGATGTATTTTTGTATCTTAACGATGGGATTGGTGTGGTGGGTAAAATTTTATGTACAGATAATTCAAGCTGGACAAGGAGCCGGAAGTTCAAGCTAGGAGCTAGAGTTGTAAGTAACTTTGATGGATTTAGAATAAAAGAAGCAAAGACAGACTCATTTATTGTCAGGGATCACCGAGGGGAATTGTACAAGAAACACCACCCTCCTAGTCTGTCTGATGAAGTCTGGAGATTAGAAAAGATTGGCAAGGATGGAGCTTTCCACAAGCGTTTGAGTCAGGAAAATATCAATACTGTAGAAGATTTTCTCACACGTCTCAACTTAGACTCAGCAAAGCTACGCAGTATACTGGGGACAGGTATGTCTGCAAAAATGTGGGAAGCAACAGTGGAGCATGCTCGAACGTGTGTGCTTGATTCGCGGAGATTTTTGTACTTCCCTTCTAATTCTCAACCAAAAACTGGCGTAGTCTTCAATGCCGTTAGACAAGTGACGGGGCTGCTCTCCAAAAGCCAGTATGTCCCTGTAGATAAGCTGTCGGAAACTGAAAAGGCACTCTTCTCTAATCTACTTTTTTTTTTTTGCCTCTCCTGCTCCATTCCTTTCTCCATTTCTAACCATCTAACTAAACCTAATGTATACTGTCAGGCCGATGCTCAAAGTTTAGTAACTTCTGCAATTCGACAAAAGGAGGAATTTGACTCATTCAATGATGAAGCCTCTCTGATGGCGGGTTGTTCACAATTAGACAATGTACTTTCCTCATGCTCACCCAGATCAGATGAATTTAGTGCCAACGAGCTTTTGTCTCCTCAGAAGACTGATCGATTTGATTACTTCCAAGGGAGTGCCCCCACTCCGGATATCATGTCATCTGTGTACTCTATGGGAGCTAGTGCCTTGGATGAATATTTGTTGCCCATCAGTGACAGCATGAACTTTAGATATGACCAAACGCTTGGTTTTCCAGTCCAATCTCCTAATTCTTTCATTGGTGAAACAGATACTATGACTCATGTCTTCGATGACCAGGCTCATCATTTCTTCGATACTCCATGTCTGGCTAAGCAAGCTGAAGTATCGAGTGCTGTTTATGGCAAAGCTCAGAAGAGATGGAGAATGGTATTCAATGTCCTAAAATGGCTCCTGTTGAGAAAAAAGAAGCCAGGACTGTGA 1704 0.4308 MSQKRRPEDGKAKSESSSSEDKRRKVPAFSSVVQEVIKFNSVRNLLEPILEPLLRRVVKEEVESALKRHLMSMKQVCEKEVVTPESRNLLLQFENNISTPIFTGAPIEGEDGSNLRISLIDSLTGQVVSSGPESTAKVEILVLEGDFEDRSDIWTPEEFRSNIVRERDGKKPLLMGDVFLYLNDGIGVVGKILCTDNSSWTRSRKFKLGARVVSNFDGFRIKEAKTDSFIVRDHRGELYKKHHPPSLSDEVWRLEKIGKDGAFHKRLSQENINTVEDFLTRLNLDSAKLRSILGTGMSAKMWEATVEHARTCVLDSRRFLYFPSNSQPKTGVVFNAVRQVTGLLSKSQYVPVDKLSETEKALFSNLLFFFCLSCSIPFSISNHLTKPNVYCQADAQSLVTSAIRQKEEFDSFNDEASLMAGCSQLDNVLSSCSPRSDEFSANELLSPQKTDRFDYFQGSAPTPDIMSSVYSMGASALDEYLLPISDSMNFRYDQTLGFPVQSPNSFIGETDTMTHVFDDQAHHFFDTPCLAKQAEVSSAVYGKAQKRWRMVFNVLKWLLLRKKKPGL 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g0193 567 PANTHER OS02G0177800 PROTEIN 3 379 IPR012416 GO:0005516
Lele23g0193 567 MobiDBLite consensus disorder prediction 1 25 - -
Lele23g0193 567 Pfam Calmodulin binding protein C-terminal domain 319 366 IPR046829 -
Lele23g0193 567 Pfam Calmodulin binding protein central domain 246 312 IPR046830 -
Lele23g0193 567 Pfam Calmodulin binding protein-like N-terminal domain 91 234 IPR046831 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g0193 Lele-ChrLele23 1258466 1262913 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g0193 1 374 Calmodulin-binding Proteins AT5G62570 62.567 7.01e-166 474
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele23g0193 23 1258466 1262913 Lele23g0193 23 1258466 1262913 ECH
Lele21g1814 21 25755661 25760303 Lele23g0193 23 1258466 1262913 hybridization
Lele22g1791 22 23072911 23077584 Lele23g0193 23 1258466 1262913 hybridization