Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g0169 ATGAAGGTTGTTCTGTATTTCACCTTCTCTATCTTTTGCTTCCTGCTGCTTTTGGATTGGTCCGTTTCACTTCCTCTATGTATTGATTCCAGAGCACCCTTTACTCTCAACACGATACTGAGCTTTTGTCCGTATAATGGAACCACGTGCTGCAATTCCACACAAGATTCACAACTAGCAAAGCAATTCCAAGTGATGAATATATCTAATTCTGGCTGTGCTTCCGTTTTGAAATCAATACTTTGTGCGAGGTGTGACCCGTTTTCAGCTGAGTTATTTACGGTTCCATCCTCTCCCAGATCGGTTCCTGTCCTATGCAATTCTACCATTTCGACGAATACTACTCAGCCAAAGACGGCAGTAGAGGACTACTGCTCCCTAGTTTGGGATACATGCCAGAATGTGTCCATAGCAAATTCTCCATTTTCTCCTACGTTGCAAGGTCAGACAGGAGGAGCTACAGTAAGTACTGAAGCTGCCATGCTCACTGAACTTTGGCAGTCCAAAACTGATTTCTGCAAAGCATTTGGTGGAGTTTCGAGTGATGAATCAGTATGTTTTGATGGTGAACCTGTTGAACTAAATAAAACCAAGACTCCCAATAGCCCTCCAGATGGCTTGTGTCTTGAGAAAATTGGCAATGGATCTTATCTCAACATGGTTGCTCATCCTGATGGTTCTAATCGCGCTTTCTTCTCTAACCAAATGGGTAAAGTATGGTTGGCAACACTACCAGCTGAGGGTTCGGGAGGGACAATGAAGCTTGATGAATCTAGCCCCTTTGTTGATCTAACCGATCGAGTCTATTTCGATTCGGCATTTGGAATGATGGGCATGGCATTTCATCCAGACTTCGCAAAAAATGGTCGATTTTTTGCGTCATATAATTGTGATAAGTCCAAGTCACCACAATGTGCAGGAAGATGTTCATGTAACTCAGATGTTAATTGTGATCCATCAAAGCTAGGTACTGAAAATGGTGCTCAACCATGCCAGTATCATACTGTTATAGCAGAATGTACCGTTAATGGTACTGCAACCCAGCCTTCCATGGCAGAAAGTGCTAAACCCATAGAGGTGAGAAGGATATTCACAATGGGTCTCCCATTTACTTCTCAACATGGAGGTCAGATACTCTTTGGACCTGATGATGGGTATTTATACTTCATGATGGGATATGGAGGTGGCAGTGGTGATCCATATAATTTTGCCCAGAACAAGAAATCATTGCTTGGAAAGATCATGAGACTTGATATTGACAACATTCCAAGTGCAGAAGAAATTGCCAAACTTGGTCTTTGGGGTAACTACTCTATTCCTAAGGATAATCCATTTACTGAAGATGCAGATCTCCAGCCTGAAATCTGGGCATTGGGACTTAGAAATCCTTGGCGCTGTAGTTTTGATTCAGAAAGACCTTCCTACTTTGTGTGTGCAGATGTTGGCCAGGATCTTTATGAGGAGGTGGATCTCATTACAAAAGGAGGGAACTATGGGTGGCGTGTTTATGAGGGCCCCTACAAATTCACCCCTAAAGATTCGCCTGGAGGCAACACTTCTTTGAACTCCATAAATCCAATATTCCCAATAGCAGGTTACAACCATTCCGAAGTAAACAAGAATGAAGGATCAGCCTCCATTATTGGGGGCTATTTCTATAGGTCTATGACTGATCCTTGCATGTATGGAAGGTACTTGTATGGAGATCTGTATGCAGTTGCTATGTGGTCAAGCATTGAGGATCCAGAAAATAGTGGAAACTTCACTACAAACAAAATCCCTTTCAGTTGTGCACGTGATTCTCCTATCAAATGTGACTCTGTACCTGGAAGCTCCCAGGCATCTATAGGTTACATCTTCTCATTTGGGGAAGACAACAATAAGGATGTTTATGTGCTTGCAAGCTCCGGTGTTTACCGTGTCATTCGTCCAAGTCGGTGCGGTTACACTTGCTCGAAGGAAACTGCTGCACCAACAGGTTCTAGCCCAGCTCCTTCTCCACCTAATGCTAGCCGCGGGAGTATCCTTTCTGACAATCTGTTTCTGCAGCTTTCATATTTCCTGTTGTATCTCACGTGTTATTGTCTTCTGAACATTATGTAA 2103 0.4308 MKVVLYFTFSIFCFLLLLDWSVSLPLCIDSRAPFTLNTILSFCPYNGTTCCNSTQDSQLAKQFQVMNISNSGCASVLKSILCARCDPFSAELFTVPSSPRSVPVLCNSTISTNTTQPKTAVEDYCSLVWDTCQNVSIANSPFSPTLQGQTGGATVSTEAAMLTELWQSKTDFCKAFGGVSSDESVCFDGEPVELNKTKTPNSPPDGLCLEKIGNGSYLNMVAHPDGSNRAFFSNQMGKVWLATLPAEGSGGTMKLDESSPFVDLTDRVYFDSAFGMMGMAFHPDFAKNGRFFASYNCDKSKSPQCAGRCSCNSDVNCDPSKLGTENGAQPCQYHTVIAECTVNGTATQPSMAESAKPIEVRRIFTMGLPFTSQHGGQILFGPDDGYLYFMMGYGGGSGDPYNFAQNKKSLLGKIMRLDIDNIPSAEEIAKLGLWGNYSIPKDNPFTEDADLQPEIWALGLRNPWRCSFDSERPSYFVCADVGQDLYEEVDLITKGGNYGWRVYEGPYKFTPKDSPGGNTSLNSINPIFPIAGYNHSEVNKNEGSASIIGGYFYRSMTDPCMYGRYLYGDLYAVAMWSSIEDPENSGNFTTNKIPFSCARDSPIKCDSVPGSSQASIGYIFSFGEDNNKDVYVLASSGVYRVIRPSRCGYTCSKETAAPTGSSPAPSPPNASRGSILSDNLFLQLSYFLLYLTCYCLLNIM 700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g0169 700 PANTHER HEDGEHOG-INTERACTING PROTEIN 56 658 - -
Lele23g0169 700 Pfam Folate receptor family 44 178 IPR018143 -
Lele23g0169 700 SUPERFAMILY Soluble quinoprotein glucose dehydrogenase 209 530 IPR011041 -
Lele23g0169 700 Pfam Glucose / Sorbosone dehydrogenase 229 508 IPR012938 -
Lele23g0169 700 Gene3D - 211 614 IPR011042 -
Lele23g0169 700 FunFam HHIP-like 1 211 636 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g0169 Lele-ChrLele23 1069444 1072858 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele17g1004 17 20811792 20815073 Lele23g0169 23 1069444 1072858 CCT
Lele18g0531 18 3131485 3136356 Lele23g0169 23 1069444 1072858 CCT
Lele19g0555 19 3199480 3201549 Lele23g0169 23 1069444 1072858 CCT
Lele23g0169 23 1069444 1072858 Lele24g1772 24 22896136 22901242 ECH
Lele23g0169 23 1069444 1072858 Lele23g0169 23 1069444 1072858 ECH
Lele21g1843 21 25937817 25943704 Lele23g0169 23 1069444 1072858 hybridization
Lele22g1817 22 23249165 23252335 Lele23g0169 23 1069444 1072858 hybridization