LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele23g0148	ATGAATTTGCAGAGCGGTCTTCCCCTGCTTTTGCAACATTACATAGCGCTTTTGAAGAAGAACTTCTTGCTCTCATGGAGGAACAGGAAGGCTTCGCTCCTCCAACTTCTCTCTCCTCTCTTCTTCATGTTCCTTTTATTCGCCATTGATCGGGCCTATCAGGCTCGCTACTCCTCGTCTACGGCTAACGAGAGCGTCAACGATCCCAGCACGTTGATCTCTCCTCCTATCACTCCCTGTGAGGACAAGTTCTTCGTTAAGCTTCCTTGCTATGATTTTGTTTGGAGCGGAAATGGGAACCCCAAATTTCAGACCATTGTCAACCGTATCATGGCTAACAATCCCGGCCGGCCCATACCTTCCTCTAAGGTTCTATCCTTTAGCAGTGCAGCTGAAGTGGATGACTGGCTTTTCAAGAATCCTCTGCGTTGTCCGGGTGCTCTACATTTCACCGAAAAAAATGCGACTGTCATTGGCTATGGTGTGCAGACGAATTCAACTTTTATACAAAGGAGAGGGCATTATGAAGATCCCACTTTTGCATTTCAACTCCCACTTCAGCTTGCTGCGGAGCGTGAAGTTGCTAGATACCTGATTGGAGTGGGTTCAATAGGTCCATCGTTTTTCCTTTCAATCGCCATGTTTAACTTTGTACTTCAGATGGAATCTTTGGTGACAGAAAAAGAAAATAAACTTCGTCAGGCAATGAAGATAATGGGCCTGTATGACTCCGCTTACTGGTTATCCTGGCTTACCTGGGAGGCAGTTATTACACTTATCTCATCACTTCTCATAGTTCTTTCCGGAATGATGTTTCAATTTGATGTTTTTCTGAAAAACAATTTCACGATCGTGTTTCTTCTGTTCTTCCTTTTTGAACTCAGCATGATCGTTATACAAGCAGGATATCCATATGAGAAAGACACCTCCGAGGCTTTCCGAGCTGTCTGGTCATTTTACCCACCTAATCCATTTGCTCAAGGTCTATATAATGATATCTATATGTGGCTGTTGGGCACATTCTTTCTGTGGTTTATTCTGGCTATCTACTTCGATAACATAATCCCGAATGCATCTGGTGTGAGGAAACCAGTCTTCTACCTAAATCCCAGAGGAAAACATGGTAAAGCAGCAAGCAGCAAGCAGCAAGCAGCAGAAGGCATGGTAGACCCAAATGTTGCTGTTCAGATACGTGGCCTTGCGAAGACATATCCTGGTGCATTGAACATTGGCTGCTGCTGTAAATGCAAAAGAACTAATGCTTTCAATGCCGTTAAGGGCTTATGGGTAAATTTTGCAAAGGATCAGTTGCTTTGTCTTCTGGGACCCAATGGAGCTGGGAAAACTACTGTTATTGATTGTTTGACTGGGATAACTCCAGTGACAGATGGAGATGCATGGATATATGGACATTCCATAAGTAGCTCCACAGGCATGTCAAACATTCAAAAGCTTATAGGCGTCTGTCCCCAGTTTGATATCTTATGGGATGCATTGTCTGGTGAAGAACACCTCCATCTCTTCGCTAGCATTAAAGGGCTTCCCCCTTCTTCCATCAAATCAATTACTCAGAAGTCATTAGCAGAAGTGAGACTGACAGAGTCGGCCAAAGTTAGAGCTGGAAGTTACAGTGGGGGAATGAAACGCCGTCTTTGTGTTGCCATTTCCCTTATTGGTGATCCTAAGCTAGTCATTATGGATGAACCGACAACTGGCATGGATCCAATAACAAGGAGGCATGTGTGGGACATAATTGAAAATGCAAAACGGGGGCGTTCTATTGTCCTTACAACACACTCTATGGAGGAGGCTGACATTCTAAGCGACCGTATAGGAATCATGGCAAAAGGAAGACTTCGCTGCATTGGCACCTCAATGCGGTTGAAATCACGTTTTGGTACTGGTTTTATAGCTATTATCAGCTTCCATGGAAACAATTTTGAAGAAAGTCCTGCCGATAGAGATGCCACTTCTACAAGAAATCACGAGACAAATTTAGATGTGGTACCAAAGGAAGAGAACAGTGCCTTTTTAACATATGTGATTCCTCATGATAGAGAGAAATTTTTTGAGGAACTCCAAGATAGAGAAGAAGAATTTGGCATATCTGATATCCATTTTGGTCTTACAACTCTAGAAGAGATACCTGTGGGAGCAAGGTTTGTGGGAATTCCAGGAACTGAATCTGCAGAAAACCCCAGAGGGATTATGGTTGAGGTATATTGGGAGCAAGATGATGCTGGTGCCCTCTGCATTGCTGGACACTCACGGCAAGTTCCTGTACCTCCTACTGTTCAACTATCTGCTCCTCCGGCCTTAACAAGACGCCGAAGTCTCAGGCGACGGTCAGAACCAGTTGAGGGGATTGTGATTGGCCCCACTCAAGTTACTACTGTCAATTTCCAGTGA	2409	0.4425	MNLQSGLPLLLQHYIALLKKNFLLSWRNRKASLLQLLSPLFFMFLLFAIDRAYQARYSSSTANESVNDPSTLISPPITPCEDKFFVKLPCYDFVWSGNGNPKFQTIVNRIMANNPGRPIPSSKVLSFSSAAEVDDWLFKNPLRCPGALHFTEKNATVIGYGVQTNSTFIQRRGHYEDPTFAFQLPLQLAAEREVARYLIGVGSIGPSFFLSIAMFNFVLQMESLVTEKENKLRQAMKIMGLYDSAYWLSWLTWEAVITLISSLLIVLSGMMFQFDVFLKNNFTIVFLLFFLFELSMIVIQAGYPYEKDTSEAFRAVWSFYPPNPFAQGLYNDIYMWLLGTFFLWFILAIYFDNIIPNASGVRKPVFYLNPRGKHGKAASSKQQAAEGMVDPNVAVQIRGLAKTYPGALNIGCCCKCKRTNAFNAVKGLWVNFAKDQLLCLLGPNGAGKTTVIDCLTGITPVTDGDAWIYGHSISSSTGMSNIQKLIGVCPQFDILWDALSGEEHLHLFASIKGLPPSSIKSITQKSLAEVRLTESAKVRAGSYSGGMKRRLCVAISLIGDPKLVIMDEPTTGMDPITRRHVWDIIENAKRGRSIVLTTHSMEEADILSDRIGIMAKGRLRCIGTSMRLKSRFGTGFIAIISFHGNNFEESPADRDATSTRNHETNLDVVPKEENSAFLTYVIPHDREKFFEELQDREEEFGISDIHFGLTTLEEIPVGARFVGIPGTESAENPRGIMVEVYWEQDDAGALCIAGHSRQVPVPPTVQLSAPPALTRRRSLRRRSEPVEGIVIGPTQVTTVNFQ	802

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele23g0148	802	PANTHER	ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA	18	299	IPR026082	GO:0016020\|GO:0055085\|GO:0140359
	Lele23g0148	802	Pfam	ABC-2 family transporter protein	197	300	-	-
	Lele23g0148	802	ProSiteProfiles	ATP-binding cassette, ABC transporter-type domain profile.	395	641	IPR003439	GO:0005524
	Lele23g0148	802	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	417	623	IPR027417	-
	Lele23g0148	802	CDD	ABC_subfamily_A	395	629	-	-
	Lele23g0148	802	FunFam	ABC transporter A family member 2	385	649	-	-
	Lele23g0148	802	ProSitePatterns	ABC transporters family signature.	543	557	IPR017871	GO:0005524\|GO:0016887
	Lele23g0148	802	Pfam	ABC transporter	428	570	IPR003439	GO:0005524
	Lele23g0148	802	SMART	AAA_5	434	618	IPR003593	-
	Lele23g0148	802	Gene3D	-	382	659	IPR027417	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele23g0148	Lele-ChrLele23	950174	957012	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele23g0148	436	660	Calmodulin-binding Proteins	AT2G36910	21.186	6.79e-08	54.7