Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g0147 ATGATAGAATCTGTTGGGATTTTCAAACTAGGAATCGATCAGAAAGGCCAATTTGACAGAGACAAGCCAGAGCTCTGTCTCTCACTTCACTCTGCCTTCTCCTTCGTCATAGTGCTCCTGCTATCATCAACCATGATCAGGTTCATCGTAAACAGAGGAGTGCAATCTTCGACTTCGCGGAAGTCTCTTGCCGTTTTTAGCCTCTCACGGTCTGCTCATTCATCATTTGCAACTGTTGAAGCTGAAGAGATATCAGGTTCTCGACCTGCTGAAGTTCACAACTTGGTGCAGGGAAAATGGATAGGATCCTCGAAGTGGAACACTCTTGTGGATCCTCTAAATGGAGAGCCCTTTATTAAAGTTGCTGAAGTTGATGAAACGGGCATTCAGCCTTTTGTTGAAAGCTTGTCTAGCTGTCCGAAACATGGTCTACACAATCCCTTTAAAGAACCGGAGAGATATCTTTTATATGGAGAAATAACTGCTAAGGCAGCTCACATGCTATCACTTCCGAAGGTTTCAGATTTCTTTACAAGGCTGATACAACGGGTTTCTCCAAAGAGTTATGCGCAGGCTCATGCAGAAGTTTACGTAACAAGGAAGTTTTTAGAGAATTTTTCTGGAGATCAGGTTCGTTTCTTGGCAAGGTCTTTTGGAGTACCTGGGAATCACCTTGGACAGCAAAGTCATGGTTTTTGCTGGCCATATGGCCCGGTGGCACTCATTACTCCTTTCAATTTTCCCTTAGAGATACCAGTCCTTCAGTTAATGGGTGCACTTTACATGGGCAACAAACCAGTCCTTAAAGTCGACAGCAAGGTGAGCATAGTCATGGACCAAATGCTACGTCTTCTTCATTGCTGTGGGTTGCCTGTTGAAGATGTTGACTTCATAAATTCTGATGGGAAGACAATGAACAAGCTATTACTGGAGGCAAAACCTCGAATGACCCTTTTCACTGGTAGCTCAAGAGTGGCTGAAAAATTGGCCGGTGATTTAAAGGGTCGCATTAAATTGGAAGATGCTGGATTTGACTGGAAAATACTAGGCCCCGATGTCCAAGAGGAAGACTATGTTGCCTGGGTCTGTGACCAGGATGCATATGCATGTAGTGGCCAGAAGTGCTCAGCACAATCATTGTTATTTATTCACGAGAACTGGTCTAAAGATTCATTGATATCTAAGTTGAAGGATCTTGCTGAGAGAAGAAAGCTAGAAGACTTGACCATTGGTCCAGTCCTGACTGTAACAACTGAATCAATGCTAGAGCACAAGAATAACCTACTTCAGATACCAGGTTCAAAGCTGCTCTTTGGGGGCCAGCCTTTAGAGAAACATTCAATTCCTTCGATATATGGTGCTATAAAACCAACTGCCATTTATATTCCTCTTGAGGAAATCGTGAAGGAAAAAAATTATGAGCTTGTTACAAAAGAAATTTTTGGCCCTTTCCAGGTTATTACTGACTATACAAGCGATCAACTCCCAGTGGTGCTAGATGCTTTGGAGAGAACGGATGCCCATTTAACAGCTGCTGTAGTTTCAAATGATCCCCACTTTTTACAGGAAGTCATTGGCAAAACAGTAAATGGGACTACTTATGCTGGTCTAAGAGCAAGAACTACCGGAGCTCCGCAGAACCACTGGTTTGGACCTGCTGGGGATCCTAGAGGCGCAGGAATCGGAACCCCGGAGGCGATAAGGCTTGTCTGGTCTTGCCACAGAGAGATTATTTATGATGTGGGGCCCATCCTTAAGAATTGGGAAATTCCACCTTCATCTTAA 1785 0.4381 MIESVGIFKLGIDQKGQFDRDKPELCLSLHSAFSFVIVLLLSSTMIRFIVNRGVQSSTSRKSLAVFSLSRSAHSSFATVEAEEISGSRPAEVHNLVQGKWIGSSKWNTLVDPLNGEPFIKVAEVDETGIQPFVESLSSCPKHGLHNPFKEPERYLLYGEITAKAAHMLSLPKVSDFFTRLIQRVSPKSYAQAHAEVYVTRKFLENFSGDQVRFLARSFGVPGNHLGQQSHGFCWPYGPVALITPFNFPLEIPVLQLMGALYMGNKPVLKVDSKVSIVMDQMLRLLHCCGLPVEDVDFINSDGKTMNKLLLEAKPRMTLFTGSSRVAEKLAGDLKGRIKLEDAGFDWKILGPDVQEEDYVAWVCDQDAYACSGQKCSAQSLLFIHENWSKDSLISKLKDLAERRKLEDLTIGPVLTVTTESMLEHKNNLLQIPGSKLLFGGQPLEKHSIPSIYGAIKPTAIYIPLEEIVKEKNYELVTKEIFGPFQVITDYTSDQLPVVLDALERTDAHLTAAVVSNDPHFLQEVIGKTVNGTTYAGLRARTTGAPQNHWFGPAGDPRGAGIGTPEAIRLVWSCHREIIYDVGPILKNWEIPPSS 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g0147 594 PANTHER ALPHA-AMINOADIPIC SEMIALDEHYDE DEHYDROGENASE 73 593 IPR044638 GO:0004029
Lele23g0147 594 FunFam Aldehyde dehydrogenase 12 351 539 - -
Lele23g0147 594 FunFam probable aldehyde dehydrogenase 85 343 - -
Lele23g0147 594 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 84 343 IPR016162 GO:0016491
Lele23g0147 594 Pfam Aldehyde dehydrogenase family 159 537 IPR015590 GO:0016491
Lele23g0147 594 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 368 379 IPR016160 GO:0016491
Lele23g0147 594 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 348 537 IPR016163 GO:0016620
Lele23g0147 594 SUPERFAMILY ALDH-like 92 562 IPR016161 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g0147 Lele-ChrLele23 941055 948407 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g0147 45 594 Aldehyde Dehydrogenase Gene Family AT5G62530 79.137 0.0 936
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele23g0147 23 941055 948407 Lele23g0147 23 941055 948407 ECH
Lele21g1867 21 26079615 26086876 Lele23g0147 23 941055 948407 hybridization
Lele22g1837 22 23368373 23375187 Lele23g0147 23 941055 948407 hybridization