Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g0146 ATGGTAACAAAAGAAGATAGGTACGTAGTTAGGGCAACCCACGAGGTTAAATGTTACTTGACTTCATCAAGAATAGACGAAGAAATACGAACGGCGGTTCCGGTCACCGGAGGCGGCAAACAAGCTATGGAATTTGCTTCAGGAAGATCTGGTAGCAGTGGTGATGATGAAGATCATCGTAAAGAAGGGATTGATATTGAGGTGCCGCCAGTGGATGCTTGGGGACCAAATATTGTATCCCCAACTAAAAAGGATGAGGTGGAGGAGCTAGAATGTGCAAAAACGGAAATGGGAGAGGTGAGAGAAGAAAATGAAAGGCTGAAGCAGTGTTTGGATCGAGTTCTGAAGGATTACAGAACACTTGAATTGCAATTCAAAGATATTCTTCATAAAGAAACTAAAGAGGAAGAATCTGATGACCTAGTTTCTCTGAGCCTTGGAAGAGTTCATAATAATCATCCAACAAGAAACCAACATGATCATCAGAAAACAAAAGCTTTGAAACCATTATTATTGAAGAAGGATCATGAAGATCAGGACTTGGCTCTTGGATTGGACTGCAAATTTGAAACTTCAAAGTCAGGAAGCATAACTACTAATAATCCAAGCCCTACGAATAGTTCTCAAGAGCCACCAAGTAAAGCTATCAAAACAAGCAGAGATACTTCTTCTGCTGAAGACGAAGTTTCCCAACACAATAATCCTGCAAAGAGAGCTCGGGTTTGTGTTAGAGCAAGATGTGACGCTCCAACTGTGCAAAGATGTGCTGAGGATATGTCCGTTTTAGTTACAACTTATGAGGGAATCCATAACCATCCTCTTCCTCTCTCAGCCACCGCCATGGCTTCCACTACTTCTGCAGCAGCTTCCATGCTTTTGTCTGGTTCATCATCATCAACTTCATCGGCTGCCACCGCCATGACCACGGCTACTTCAGCTGATCTCTATGGCCTGAATTTCTCCTTCTCAGATGGTTCCAGCAGATCAAAACCATTATATCTCTCCAATCCTTCATCTCTCTCATCATCATTTCCTTCTCACCCAACAATCACTCTTGACCTCACCACAAATTCAGCAGCCTCCAGATTCATGACCTCATCATCATCAAACTACAGATCATCATCATCATCATTATCGTACCCCTCTTCTTCTACGAGTCTCAACTTTAGTTCCCCAAACAACAATAATTTTCTCAGCTATAACAGTAATAATAACAGGAACGTTTTCAGCTCCATGAACCTTGCAAGGTCGACAGTGATGAATAATATCTACAGCAGGCTGCCTTACGAGCAAAAGAACAGTGTTATCAATAACCCCACTCATCCTCCTCCTCATCCCCAACCTGCTCTACCGGATAGTATCGCCGCCGCGACCAAGGCCATTGCGGCGGACCCAAAGTTTCAGTCTGCTTTGGCGGTGGCACTTAGTTCAATTATTGGCACAGGAAGTGGCATTGGAAGCAGCCAAGGCAATAATCGAGGCGGCGCCGGAGAAAACTTACCTCAGAAAATGAAATGGGGAGAGCTGTTTCCGGCATTATGA 1542 0.4384 MVTKEDRYVVRATHEVKCYLTSSRIDEEIRTAVPVTGGGKQAMEFASGRSGSSGDDEDHRKEGIDIEVPPVDAWGPNIVSPTKKDEVEELECAKTEMGEVREENERLKQCLDRVLKDYRTLELQFKDILHKETKEEESDDLVSLSLGRVHNNHPTRNQHDHQKTKALKPLLLKKDHEDQDLALGLDCKFETSKSGSITTNNPSPTNSSQEPPSKAIKTSRDTSSAEDEVSQHNNPAKRARVCVRARCDAPTVQRCAEDMSVLVTTYEGIHNHPLPLSATAMASTTSAAASMLLSGSSSSTSSAATAMTTATSADLYGLNFSFSDGSSRSKPLYLSNPSSLSSSFPSHPTITLDLTTNSAASRFMTSSSSNYRSSSSSLSYPSSSTSLNFSSPNNNNFLSYNSNNNRNVFSSMNLARSTVMNNIYSRLPYEQKNSVINNPTHPPPHPQPALPDSIAAATKAIAADPKFQSALAVALSSIIGTGSGIGSSQGNNRGGAGENLPQKMKWGELFPAL 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g0146 513 MobiDBLite consensus disorder prediction 192 237 - -
Lele23g0146 513 MobiDBLite consensus disorder prediction 192 219 - -
Lele23g0146 513 MobiDBLite consensus disorder prediction 38 62 - -
Lele23g0146 513 Gene3D WRKY domain 213 276 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele23g0146 513 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 83 252 IPR044810 GO:0003700
Lele23g0146 513 Coils Coil 83 124 - -
Lele23g0146 513 ProSiteProfiles WRKY domain profile. 252 275 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele23g0146 513 MobiDBLite consensus disorder prediction 220 234 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g0146 Lele-ChrLele23 933436 936794 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g0146 89 480 WRKY Transcription Factor Family AT1G18860 31.313 4.48e-38 144
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele23g0146 23 933436 936794 Lele24g1790 24 23011108 23013805 ECH
Lele23g0146 23 933436 936794 Lele23g0146 23 933436 936794 ECH
Lele21g1868 21 26091528 26094294 Lele23g0146 23 933436 936794 hybridization
Lele22g1838 22 23384347 23387090 Lele23g0146 23 933436 936794 hybridization