Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g0145 ATGCATATAATCAGTGTAGGCTTGCTAATAAGTGGGTATGATGCACATTTGCCTTCCTTTTTTCCTTTCCCCCTTTTCCTTCTCAATGTATTTGTAGATGGGAAGCATCCCGGTTGCGACCCCTCTTACATCAGCCTGAGGGAATTTTCATTCTCGCTTGACAACGATATATTTCTACGATTCCAGTCTTTCCACAGTGTCGTGGAGCTTGAAAACTCCATCAAAGAGAAATGCCCATTTAAGATTGATATTGGACCTGTGTATAGCGTGGAGTTTTTCTCTTCCTCATCTATAGCTTGTAATGTGTTGCAGCCCACAAAAAGGCATGCCTATACTCAGACTGGTGATAATGTCTTCGCTCCAGATATGACAGATTACGATGATGTCAGATACTGCTGCACTGGTGCTGATGTTTGCTTGAATTGCTGGCCATTGATGACTATATCTATTAAAGTGATTGATACCGCCTTAAGAGGGAAAGTGATTTTTCTAGATGACGTATTTCTTCAGAAAGATGATTTTGGCTTTAAACACATACTATGGGTTTATAGTGGCCGCCGTGGTGTTCACTGTTGGGTCTGTGATGGGAAGGCAAGAAGATTGACTAACGAGCAGAGAGCAGCTATTGCTGACTATTTTCGTGTCTACAAGGTGAATAGTCAAAAGAAGGTTTCGTTGACGGGTCATGCTCTTCATCCTTTCCTGGTGAGAGCATACACTGAAGTTCTTAAAGATTTTTTTGAGAAAGGACTACTAATAAGTCAAGCTTTACTTTCTACCGAAGAGAGATATGAGATGATCCTAGAGTTGATTCCAGACGCAGTGCTTTCTGCAGCTATTGCTTCTGAACTTAGGGGTAGATGGCAAGATAATAGGTGGTCTTCAAGTGCAAAAGAAGACATTAATGCACTAGGACTGAGAAGGGGTGTTGAAGATATTGTGTTCTCCTATACTTGCCCTAGGCTAGATATGGAGGTTTCGAAGCACATGAATCACTTGCTTAAAGCTCCATTCTGTGTACACCCAAAAACAGCCAGCGAGCTTTTAGACGAGCTTAACAAAAGAGGTCCAAGAGATGATTTAGATGCGTTTGGTACAAGTATTTTTGTTTATTGGTCTTGCTCGATTTCAGAATGGACAGGAACTTCACTAGAGGGTGCCGTCAGCCTTTTCAGAACGTCATTTTTACAACCTCTACTAAAAGCTTGCAAGGAGGAGATAGAAAGTTCGTACAATGCAAAATTGCAGCAGTCAAAAAACTCCTTTAACTGGTAA 1275 0.4133 MHIISVGLLISGYDAHLPSFFPFPLFLLNVFVDGKHPGCDPSYISLREFSFSLDNDIFLRFQSFHSVVELENSIKEKCPFKIDIGPVYSVEFFSSSSIACNVLQPTKRHAYTQTGDNVFAPDMTDYDDVRYCCTGADVCLNCWPLMTISIKVIDTALRGKVIFLDDVFLQKDDFGFKHILWVYSGRRGVHCWVCDGKARRLTNEQRAAIADYFRVYKVNSQKKVSLTGHALHPFLVRAYTEVLKDFFEKGLLISQALLSTEERYEMILELIPDAVLSAAIASELRGRWQDNRWSSSAKEDINALGLRRGVEDIVFSYTCPRLDMEVSKHMNHLLKAPFCVHPKTASELLDELNKRGPRDDLDAFGTSIFVYWSCSISEWTGTSLEGAVSLFRTSFLQPLLKACKEEIESSYNAKLQQSKNSFNW 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g0145 424 Gene3D DNA primase, PRIM domain 13 405 - -
Lele23g0145 424 SUPERFAMILY Prim-pol domain 43 345 - -
Lele23g0145 424 PANTHER DNA PRIMASE SMALL SUBUNIT 33 345 IPR014052 GO:0003896|GO:0006269
Lele23g0145 424 CDD AE_Prim_S 35 344 IPR014052 GO:0003896|GO:0006269
Lele23g0145 424 Pfam DNA primase small subunit 122 347 IPR002755 GO:0003896|GO:0006269
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g0145 Lele-ChrLele23 927277 932282 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g0145 33 424 Core DNA Replication Machinery Family AT5G41880 48.643 5.38e-139 403