Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g0141 ATGCTTCCGAATAAAGAAGCTGCAACACTTGGTTTCCAAATTAGGGGTGAAGAGAAGGTGCCGCATTTGTCTGATCTCATAATGGGGAAGTCACCGGGAAAATGGATCAAAACTGTGCTATTTGGGAAAAAGTCATCCAAATCTAATATTTCAAAAACAAGAGAGAAACCTGTTAAACAGAAAGAAGCGCCGATCACTTCCAAGGCATCAGAGACTGAGTTTTCTTTTGATCCAACTCCCATTACTTTTGCTAGAAATGAGAGGGATCCAGAAAATCTTTTGCTGCAGAATCAATTAGATATCGCAGGATCTGATCGCCAAGATGCCCCTCCTGATCCAGAGAGAATTGTGCAGGAGGAAGCTGCAACAAAGGTCCCGGCTACTTTACCTCCCGATCTAGAGAAAATTAAGCAGGAGGAAGCTTCAATGGAGATGCAGTCTACTTTAACTCCTGATCTAGACAAGATAAAGCAGGAGGAAGCTGCAGTGAAGTTGCAAGCTACTTTCCGGGGTTATTTGGCTTGCAGGGCTTTCAAGACTCTTAAAGGCATTATAAGGTTGCAAGCGCTTATCCGAGGGCACTTGGTTAGGAGACGAGCTATTTCTACTTTATTTTGCATGTATGGGATTATCAAGTTACAAGCACTTGTTCGTGGTCAAAGAGTTAGGCAGTCTGATATTGGATATAAAATGCATGGGAAGTGCAATCTTGTGAAGCCTCTGGCTGACAAGTCTGGCGACTCAGTTGGGTTAACCGCAAAAATTGCAGATGTGTCAGCAAATAGTTTTATCCACAAGCTTCTTGCTTCATCAACTGCAACAACTGTTTTGCGTCGTCAATATGCTTATGGGGACCCGAATGTAGTCCTAAATTGGTTGGAGCGCTGGTCAGCATCTCGTTTTTGGAAACCAGTTCCCAAACCCAAGAAACTTCTAGACTCTAAATCCCAGAGAAAGCTGGGTAATAGTATTTCAAATGGAGATGCTCAAATGAACAAGCCAAAACGTGGTAACTGGAAGATTCCTTCTACAAGTTCAGACTTGGTCTTAGTGCAAGAAAATCCTGACTTTGACAAACCGAAACGAAGCCTGAGAAAAGTTTCCAGCAAGCCCACAGTCACAGAACCAGTGCAGGAAAATTCAGAAAATGAGTTTGAGAAGGTTAAGCGTAACTTGAGAAAGGTTCATAACCCTGTTGTAGAGAACTCTGCTCAGTCAGAAGTTGAATCAGAGACTGTGAAGCAGCATTCAAAAAAGGCACCAGTTACCTCAGGTTATGGTGTTTCAGAAGAAGGATTCAAAAGTTGTTCCAATGAGAAGATAGAAATGGATGCAACATCGGCCATGTCTGATGAGCCTGATGGAGAAGTTACACTTAGAATTTCAGTTGGCAAAGCCAAGGAGGCGTCTAACGTGCCCAGTACTCAAGTACCCGTCAATTCAGTGCCCTTGAGAGAGAATACAAGTAGACGTAAGAACAATTCTGGTGAAGAAGCTACCAAAGAGCTAAAAGATTCACATGAGACTTGTAATGATGAAAATTCTTCCCTAACAAATGGACATTTGAGTCTTAAGGAAGATTCGAAAAGAAATGAAAACCAGAAACCGGGCCGGAAATCCCCAGCTCTAGCTAAGCAGGAAGTTGTAGAGGATGGTTTACAGAATATCCCAACTGCCAGTTTACCAAGTTATATGGCGGCTACTGAATCTGCCAAGGCAAAGTTGAGAGCACAAGGGTCCCCAAGGTTAGGACAAGATGGTGGAGGTGAGAGAAGCAACATTACCCGGCGACATTCTCTGCCATCTTCAAATAACAGTAAAATTAGTTCTCATTCACCGAGAACACAGAGACCAGCTCAAGCGGGAGGCAAAGGGGGACACAGGAGTGGTGACAGAACAATGGGTTCTTCCAGAGGTAGTAATGGAAAGTTAACTCAAGCAGAGTGGAGGAGGTGA 1956 0.4346 MLPNKEAATLGFQIRGEEKVPHLSDLIMGKSPGKWIKTVLFGKKSSKSNISKTREKPVKQKEAPITSKASETEFSFDPTPITFARNERDPENLLLQNQLDIAGSDRQDAPPDPERIVQEEAATKVPATLPPDLEKIKQEEASMEMQSTLTPDLDKIKQEEAAVKLQATFRGYLACRAFKTLKGIIRLQALIRGHLVRRRAISTLFCMYGIIKLQALVRGQRVRQSDIGYKMHGKCNLVKPLADKSGDSVGLTAKIADVSANSFIHKLLASSTATTVLRRQYAYGDPNVVLNWLERWSASRFWKPVPKPKKLLDSKSQRKLGNSISNGDAQMNKPKRGNWKIPSTSSDLVLVQENPDFDKPKRSLRKVSSKPTVTEPVQENSENEFEKVKRNLRKVHNPVVENSAQSEVESETVKQHSKKAPVTSGYGVSEEGFKSCSNEKIEMDATSAMSDEPDGEVTLRISVGKAKEASNVPSTQVPVNSVPLRENTSRRKNNSGEEATKELKDSHETCNDENSSLTNGHLSLKEDSKRNENQKPGRKSPALAKQEVVEDGLQNIPTASLPSYMAATESAKAKLRAQGSPRLGQDGGGERSNITRRHSLPSSNNSKISSHSPRTQRPAQAGGKGGHRSGDRTMGSSRGSNGKLTQAEWRR 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g0141 651 MobiDBLite consensus disorder prediction 48 62 - -
Lele23g0141 651 MobiDBLite consensus disorder prediction 46 71 - -
Lele23g0141 651 SMART iq_5 157 179 IPR000048 GO:0005515
Lele23g0141 651 SMART iq_5 180 201 IPR000048 GO:0005515
Lele23g0141 651 MobiDBLite consensus disorder prediction 317 342 - -
Lele23g0141 651 MobiDBLite consensus disorder prediction 595 617 - -
Lele23g0141 651 PANTHER IQ-DOMAIN 5-RELATED 28 609 - -
Lele23g0141 651 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 152 225 IPR027417 -
Lele23g0141 651 MobiDBLite consensus disorder prediction 359 385 - -
Lele23g0141 651 MobiDBLite consensus disorder prediction 490 511 - -
Lele23g0141 651 ProSiteProfiles IQ motif profile. 158 186 IPR000048 GO:0005515
Lele23g0141 651 Pfam Protein of unknown function (DUF4005) 540 629 IPR025064 -
Lele23g0141 651 Gene3D - 156 204 - -
Lele23g0141 651 Pfam IQ calmodulin-binding motif 182 199 IPR000048 GO:0005515
Lele23g0141 651 Pfam IQ calmodulin-binding motif 160 179 IPR000048 GO:0005515
Lele23g0141 651 MobiDBLite consensus disorder prediction 313 342 - -
Lele23g0141 651 MobiDBLite consensus disorder prediction 402 651 - -
Lele23g0141 651 ProSiteProfiles IQ motif profile. 182 204 IPR000048 GO:0005515
Lele23g0141 651 MobiDBLite consensus disorder prediction 468 489 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g0141 Lele-ChrLele23 904710 909620 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g0141 28 651 IQD Protein Family AT1G74690 39.082 3.82e-107 334
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele23g0141 23 904710 909620 Lele24g1794 24 23036338 23051823 ECH
Lele23g0141 23 904710 909620 Lele23g0141 23 904710 909620 ECH
Lele21g1872 21 26113276 26116792 Lele23g0141 23 904710 909620 hybridization
Lele22g1842 22 23408668 23412309 Lele23g0141 23 904710 909620 hybridization