Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g0130 ATGAATTTCTGTATGCCCTCTTTGGTTGTTTCCCGGTCGACTTCTATGAAATATGTGGCCTTTGGAAATGAAGATCTTAGTGAGTTGAATGTTACAGCTAACAAGACTGCAAGACTAGTTACTAATTTGGAATTTGTGTTGTACTGGAAGAACCGTGTAAAGGCATCCCTTGCTTTTGTTACTACTTTTATGGGATCAGAAGCTCCCGCTCTGGAAGCTGAGGAAGTCAATATGTTAGAAGGAACATCAAAAACCAGTTCTTGTCCTGGTAAAAAGACCCAGGGGAAAATCCCCAAAAGAATTCACAAGGCTGAAAGGGAGAAAATGAAACGTGAGCATTTGAATGATCTCTTTCTTGATCTTGCCAATGCTATTGAACTCGGTCAGCAGCAAAACAATGGAAAGGCGTCCATATTGTGTGAAGCGACTAAGCTGCTAAGGGATCTGCTTGGTCAGATTGAGACCCTTAAGAAGGAGAATGTGTCTCTGCTTTCTGAATCACATTATGTCACCATGGAGAAGAATGAGCTGAAGGAGGAAACTTCTGCTTTAGAAACACAAATCGAGAAACTTCAAGGGGAGATAGAAGCACGAGTAGCACCATCTAAACCCGACCTAAATGCACCTCCTCCAATGGAACTTGAGCCACCAGAGCAAACAATAATTGTTCCCAGAGAGTGTCTACAATTGCCTTCTGTTGATCCTACATTGCAACAAGGACCTGCTGTATTAGTTGTCCCCTTTCGTCCTCACCTTCAACCTTCGTTTCCCACCCCCAACATCGCCGAGCTCACCTCAAACTCCGTCGTGAGTAAACCTCATGCCAGGTATCCCACCCCTGCAGACTCATGGCCATCGCAGCTGCTTGGAGGGCAGCCAACATCAAGCTAA 891 0.4478 MNFCMPSLVVSRSTSMKYVAFGNEDLSELNVTANKTARLVTNLEFVLYWKNRVKASLAFVTTFMGSEAPALEAEEVNMLEGTSKTSSCPGKKTQGKIPKRIHKAEREKMKREHLNDLFLDLANAIELGQQQNNGKASILCEATKLLRDLLGQIETLKKENVSLLSESHYVTMEKNELKEETSALETQIEKLQGEIEARVAPSKPDLNAPPPMELEPPEQTIIVPRECLQLPSVDPTLQQGPAVLVVPFRPHLQPSFPTPNIAELTSNSVVSKPHARYPTPADSWPSQLLGGQPTSS 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g0130 296 Pfam Helix-loop-helix DNA-binding domain 99 149 IPR011598 GO:0046983
Lele23g0130 296 MobiDBLite consensus disorder prediction 271 296 - -
Lele23g0130 296 Gene3D - 91 166 IPR036638 GO:0046983
Lele23g0130 296 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 99 177 IPR036638 GO:0046983
Lele23g0130 296 CDD bHLH_AtILR3_like 103 178 - -
Lele23g0130 296 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 98 149 IPR011598 GO:0046983
Lele23g0130 296 Coils Coil 174 194 - -
Lele23g0130 296 Coils Coil 146 166 - -
Lele23g0130 296 PANTHER TRANSCRIPTION FACTOR BHLH47 64 295 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g0130 Lele-ChrLele23 841601 844194 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g0130 64 290 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G47640 49.187 1.13e-63 199
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele23g0130 23 841601 844194 Lele24g1803 24 23097605 23105828 ECH
Lele23g0130 23 841601 844194 Lele23g0130 23 841601 844194 ECH
Lele21g1885 21 26182152 26184409 Lele23g0130 23 841601 844194 hybridization
Lele22g1853 22 23485829 23492380 Lele23g0130 23 841601 844194 hybridization