Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g0118 ATGAAGAAGGTAATAACTAGAGTTGACAACACGGTGGTTCGAAACATTCGATACGGTGAGTGTCAGAAGAATCATGCAGCTTCCATGGGAGGGTATGCTGTGGATGGTTGCAGAGAATTCATGGCCAGTTCCAGAGAAGGCACGAGTGGGGCTCTCACTTGTGCGGCTTGCGGCTGCCACCGTAATTTCCACAGAAAACAAGAGCAAGTCGTCGAGGGGTCGTCTAGTCATAGAAAGATTTCTCAAACCAATAACAAGCAGGAGGCTCTTAGTTTCAGATTCTGCAGAAATCGTGCATGA 300 0.4767 MKKVITRVDNTVVRNIRYGECQKNHAASMGGYAVDGCREFMASSREGTSGALTCAACGCHRNFHRKQEQVVEGSSSHRKISQTNNKQEALSFRFCRNRA 99
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g0118 99 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 18 67 IPR006456 -
Lele23g0118 99 TIGRFAM ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain 17 67 IPR006456 -
Lele23g0118 99 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 14 77 - -
Lele23g0118 99 Pfam ZF-HD protein dimerisation region 16 68 IPR006456 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g0118 Lele-ChrLele23 756235 757263 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g0118 13 67 Zinc finger-homeobox gene family AT3G28917 78.571 3.52e-28 96.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Lele23g0118 ZF-HD_dimer 8.9e-30 No_clan