Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g0103 ATGGAAAACATTGCTATTCAGTACAACAAGGATGAAGATCGGATGAATTTGCCTCCTGGCTTTCGGTTTCACCCAACAGATGAAGAGCTTATCACTCATTATCTGTTCAACAAGGTCACTCTTACAAACTTCTCTGCTATAGCCATTGGAGAAGTGGACTTGAACAGGTCCGAGCCTTGGGATTTGCCACGGAAAGCGAAACTGGGAGAGAAAGAGTGGTTAGATGGTAAATTCTCTGTCCACAACCTCCCCAAAACTGCAAAGAACGAGTGGGTTATTTGCAGGGTGTTTCGGAAGAATTCTGGTGGCAACAAAACCCATATATCGGCTAGAATGAGGTTTGAATCCACTGGAAATGGATTTGGTGGTTCTTCAGGTTTACCAGCTCTCGCAGATTCTTCTCCTGAATCTGCTTACGTGTCCTGCTTCTCCATTGCAACCGATGATCAAAGAAACCAAGGAGGGATCTTTGATTCCTTAGGAAACTCGAACTCCCTTTTGGGGATTACTTCAAGCCCTCCTCCAGAAATTCTCCCAAGAATCCATCTTTCTGGATCATTTCAAGCTCCTGCAAATTTGCCAATATCATCAGGTCTCGCTTTCTCTGGGCAGGACCACCAGAACCTGCTTAAGGCTTTTCTTGAAAACCATGGATCAAACTACAAGGGAGAACAAATGGCGAGTGTTCCACAAGAAATTGATATGAATCCTGAGATTTCTTCTGTGATATCAAGTTTTGATGATTCTGCTGCTGCACCAGTAGTGGAACTTAGGATTTGGTTGGATAAGGAAAGTGAAAGTGGGGTTTGTGTGCAAGTTGATGTATGA 828 0.4372 MENIAIQYNKDEDRMNLPPGFRFHPTDEELITHYLFNKVTLTNFSAIAIGEVDLNRSEPWDLPRKAKLGEKEWLDGKFSVHNLPKTAKNEWVICRVFRKNSGGNKTHISARMRFESTGNGFGGSSGLPALADSSPESAYVSCFSIATDDQRNQGGIFDSLGNSNSLLGITSSPPPEILPRIHLSGSFQAPANLPISSGLAFSGQDHQNLLKAFLENHGSNYKGEQMASVPQEIDMNPEISSVISSFDDSAAAPVVELRIWLDKESESGVCVQVDV 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g0103 275 Gene3D NAC domain 26 75 IPR036093 GO:0003677|GO:0006355
Lele23g0103 275 Pfam No apical meristem (NAM) protein 18 73 IPR003441 GO:0003677|GO:0006355
Lele23g0103 275 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 16 74 - -
Lele23g0103 275 ProSiteProfiles NAC domain profile. 17 172 IPR003441 GO:0003677|GO:0006355
Lele23g0103 275 SUPERFAMILY NAC domain 13 99 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g0103 Lele-ChrLele23 689194 690526 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g0103 15 217 NAC Transcription Factor Family AT5G07680 36.331 3.09e-36 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele23g0103 NAM 4.5e-15 No_clan