Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lele23g0101 | ATGGGAAAGGATTCAAAGCCTAAGGAGTTGGGGAAGGGAAAGGGGAAACAGGCAGCAAGTGGAAGTGATGAGAATGCCTCTAAGGGTAAGGGAAAAGGTGGGAAGGGTGCAGATGGGCTAGGTACCTGCACCTATGTTAAAGCAAGGCATATATTATGTGAGAAGCAAGGTAAGATCAATGAGGCATACAAGAAGCTGCAGGATGGTTGGCTTAGCAACGGAGATAAGGTGCCACCAACAGAGTTTGCAAAGGTAGCACAAGAATATTCAGAATGTCCATCAGGAAAGAAGGGTGGTGACCTCGGCTGGTTTCCTCGAGGAAAGATGGCTGGGCCATTTCAGGATGTTGCTTTTAGCACGGCTATCGGAGCTACAAGTGCCCCTTTCAAGTCAACGCATGGGTACCACATTGTCTTATGTGAAGGAAGGAAGAACTGA | 438 | 0.4795 | MGKDSKPKELGKGKGKQAASGSDENASKGKGKGGKGADGLGTCTYVKARHILCEKQGKINEAYKKLQDGWLSNGDKVPPTEFAKVAQEYSECPSGKKGGDLGWFPRGKMAGPFQDVAFSTAIGATSAPFKSTHGYHIVLCEGRKN | 145 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lele23g0101 | 145 | Pfam | PPIC-type PPIASE domain | 46 | 139 | - | - | |
| Lele23g0101 | 145 | SUPERFAMILY | FKBP-like | 44 | 144 | - | - | |
| Lele23g0101 | 145 | MobiDBLite | consensus disorder prediction | 1 | 39 | - | - | |
| Lele23g0101 | 145 | ProSitePatterns | PpiC-type peptidyl-prolyl cis-trans isomerase signature. | 82 | 102 | IPR023058 | - | |
| Lele23g0101 | 145 | Gene3D | - | 44 | 143 | IPR046357 | GO:0003755 | |
| Lele23g0101 | 145 | ProSiteProfiles | PpiC-type peptidyl-prolyl cis-trans isomerase family profile. | 43 | 142 | IPR000297 | GO:0003755 | |
| Lele23g0101 | 145 | PANTHER | - | 1 | 145 | IPR043323 | GO:0003677|GO:0003755|GO:0006364 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lele23g0101 | Lele-ChrLele23 | 674050 | 675054 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Lele23g0101 | 46 | 138 | Sulfurtransferasese or Rhodanese | AT5G19370 | 30.108 | 6.10e-07 | 45.4 |