Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g0089 ATGGAAGTGTTAGGAACTTCGTTTGAAGATATGAGAAGAAAAAAGAAAATGAATATTCTTTCAACAAAACGTGAACAGTATATACCACGTCATTTTGTTGCTTTGACTATTGCGTCCGCCTTTCTCTTTCTGGATGCTCTGCTTCCCTTTGGATCATCAGCTAGCTTGCTGTTTCTGAAATTCGCTGCTGCTCTTGCTCTCACTTTCAGTCGGCGATTTCTTGGCTCAATTGGAGAAATCTTGCTGGCGGTCAACCGACTTATCGGTTTGGATCCGATCGGGGTAAAAACAGCGCCATCTGATGGCGCTGTTCAGAAGGTTCTTTTACCGGAAGCCGCCGGATCGGCTTCTGGAGATCTCCGAGAGACAGTGTTTCAGTCAGAGACTGTTTTTGATTGTTGCTTCTCCACAGATGTCTTGGAAGAAGATGAATACAAAGTTTATATGGGGGGAATTGTAGCTCAGCTACAGGACCACTTTCCTGATGCTTCTTTCATGGTGTTTAACTTCAGGGAAGGGGAGAAGCGTAGTCAAATTTCAGATATATTGTCTCAATATGACATGACAGTTATGGAATACCCTCGTCAATATGAGAGTTGTCCTCTTCTGCCTTTGGAAATGATCCATCACTTCCTTCGATCAAGTGAAAGCTGGTTGTCTTTGGAGGGTCAACAAAATGTTCTTTTGATGCATTGTGAAAGAGGAGGTTGGCCTGTGCTTGCGTTTATGCTAGCAGGTCTTCTTTTGTACCGGAAACAGTACAATGGGGAGCAAAAAACCCTTGAGATGGTCTACAAGCAAGCTCCTAAAGAACTCCTCCACCTTCTATCTCCTTTGAACCCACAACCTTCTCATTTGAGATATCTTCAATACATTTCCAAGAGAAATATGGGTTCTGAGTGGCCTCCATCAGACACACCCTTATATTTGGATTGCCTGATTCTTAGAGTCCTTCCGTTATTAGATGGTGGAAAAGGTTGTAGGCCTGTTGTGCGTCTTTACGGTCAGGACCCATCAAAACTTGTTAATAGAAGTTCTAAGCTTCTTTTTTCTACTTCAAAGAACAAAAAACATGTTCGCCTCTACCAACAGGCAGAGTGTACGCTGGTGAAAATTGATATCCAATGTCGTGTTCAAGGGGACGTGGTTCTTGAGTGCATACATACGGATGATGACTTCAGTCGTGAGGAGATGATGTTTAGAGTTATGTTTCACACAGCATTTGTGCGTTCAAACATATTGGAGCTCAACCGTGACGAGGTTGATATTTTGTGGGATTCTAAGGATCAATTTCCTAGGGATTTTAAAGCAGAGGTACTTTTTTTGGACGCTGATGCTGTTATGCCTAATCTAACCAGAGTCAGGGCAAGTGAAGATGCAAATGAGACAGGAACTGCATCGCCTGAGGAATTTTATGAGGTGGAAGAGATATTTAGCAATGTAGTTGATGTGCAGGAAGGTAAGGTAGATTATGATTCTCTTCTGGCTCATGACAGTGTAATAGATGATCAAAACCAAAAAGAAGTATGGAAAGAGGACTTTGATCCTCCCACTTTTCAGGAATGTACATCAGATGATCGGACCTACAAACAGGACAGAAGGATGGATTCTGGTTCTAATGCAGTGAAAGACATTGTTGTTGATGATGTGAAGTACAGGCTTGATGAGAGTGTGGATTTTAATAATCATGAAGTGAAAGATATTGCTGTGGATGATGGAGAAATTAAGAATACCTCTACAGTAGTCACTACTGATATCGTTATGGAAATGAAGGATGTCAATGAAGACATTCCTGGGCAATTGGAAGATATGAACAACAAATATGATGAATTTGGCAATGCAATAGAGAAGAAATTAGATTCCAAGGAAGGCCAGCAGAAGCATGATTTTTCCAGACAAAAATCTGATAAAGTACCACCTGTGGCGAAAAAACAACTTTTGTCAAACTCGAAGCCAGTGGGAGATACATTTATAGCTAAGCAAAAGATTAAGCAGCTTGAATCACAAGGTAGTCTAGCAAAACAAGCAAAGCCAAATGCAGTAACTAGGTGGATTCCACCTAACAAAGGTTCTTACACAAATTCAATGCATGTTTACTATCCACCATCAAGGTATAATAGCGCACCTGCTGCTCTTTCCAACGCTAACTCTTCGAAGGAGAAAACTATAGATGCCAAATCAAGCTCTGCCTCTGCACCTATTGCCTCTGGAACACCTGTTTCTAGTGACAAGACAAATGGATTGGAATGTCAAAAGGTGGACGTACCAAAATCTGCAGACTCCATAGCAGAAATGGAAGAAGAAAACTTGCCATCAATTAAAGCGACATGTCTTCAAACACCAAGTCAAGCGCCACTTAGTAGCTCGACACAAGGGTTGCAATCTACCCCCACCCCACCCCCACCCCCACCCCCACCCCCACCCTCACCCCCTCCTTCATTTCATGCTAAAAACTCTATGGCATATGCTTTTGAAACATCATCAGTTAGTGGACAAAACCAAGAGATGGATTTACAACCTGCAACCTCTTCATCTCCTCCCCTTCCTCCACCCCCTCCTCCTTTTACTAATGGAACAATCACACCAGGAGTTTTTGGAATGTCTAGTGTAGTTGCCCCTCCTACTCCCCCTTCTCGTCCTTCACCACCACCTCCGCCGCCGCCACCTCCAAGGTATGGGCTTTCAATCTCTCTGCCTCCGCCACCTCCACCTCCACCACTATCTTCAAGGGGTATTTCTCCATTGTTGTCTACACCCACATCACCTCCCCAATCTTCACCTTCCCCTACCCAATCCCTACCTTTTCTGCAACAAGCTCCACCGCCTCCACCCCCACCCCTACCGCCACCTCCCTTCAGTAGAACTTCATTGCCCCCACTATTGTCTTCTTTGAGTAAAGCTCCACCTCCACCCCCACCTTCTTTGGGTAGACCTCCCCCTCCCCCTCCCCCTCCCCCACCTCCTTTAAGTAGAGCTTTACCACCTCCGCCGCCGCCACCTGCTCCACCTCCTTCGAGTAGGGCTCCACCACCACCTCCTCCTCCTTTTAGTAGAGCTCAACCTCCTCCTCCTATGCATGGAGCCTCGACTCCACCTCCCCCGCCTCCCCCACCTTTATCAAGAGGAGCACCACCTCCACCACCACCTCCACCATCAAGAGGAGCACCTCCTCCACCGCCACCTCCCCCACCTTTATCAAGAGGAGTACCATCGCCACCCCCACCCCCACCATCAAGAGGAGCACCTCCTCCACCGCCACCTCCATTAAATGGAGCGCCCCCACCACCCCCACCTCCAATGTCTAGAGCCCCACCTCCTGGTGGTCAAGGCCCACCTCCTCCCCCTCCTCCTGGAGCACGTGCTCCTACTCCCCCTGGACCTCCAGGTGGTACACCTCCACCGCCTCCACCCTTGGGCTCAAGAGGTTCAAATTCTGATCCAAGAGGACGAGGGCGTGGACTTTCACGTCCTAGTGGGGGTGGTGCAGTAGCACCTCGACGATCCTCCTTAAAGCCTCTACATTGGAGTAAGGTGACAAGGGCATTGCAAGGAAGTTTATGGGAAGAATTACAAAGACATGGAGAACCTCAAATTGCCCCGGAATTTGACTTTTCAGAGCTAGAGAGCCTTTTCTCTGCAAATGTTCCTAAACCTGCTGGTTCAGGTGGTAAATCTGGAGATCGACGTAAATCTGCTGGGTCCAAACCTGACAAAGTTCACTTGATTGACCTGAGGAGGGCCAATAATACTGAAATTATGCTTACAAAGGTTAAGATGCCTCTTTCTGATATGATGGCTGCAGTGCTAGCTATGGACGAGTCGATATTAGATGTTGATCAGGTTGAAAATCTCATCAAATTTTGTCCTACTAAAGAGGAAATGGAACTTTTGAAGGGATATGCTGGGGACAAGGAGAATTTGGGAAAGTGTGAGCAGTATTTTTTGGAGCTGATGAAAGTTCCACGAGTGGAGTCAAAATTAAGAGTATTTTCTTTCAAGATCCAGTTTGGTTCTCAGATTACTGAATTCAAGAAGAGTTTAAACACTGTGAACTCTGCCTGTGAAGAGGTCCGAAAATCTGTCAAACTGAAGGAGATAATGAAGAAAATTCTTTACTTGGGGAATACACTGAATCAAGGAACAGCAAGGGGATCTGCAGTTGGATTCAAGTTGGATAGTCTATTAAAGCTCACAGACACTCGTGCTTCTAACAATAAGATGACACTGATGCATTACCTTTGCAAGGTCCTTGCTGAAAGGGCACCTGAGCTTCTTGATTTTCACCTAGACCTAGTCAGCCTGGAAGCTGCTACTAAGATACAATTGAAGTCATTAGCTGAAGAGATGCAGGCAATCATCAAGGGATTAGAAAAGGTCAAGCAGGAGCTTGCTGCATCTGAAAACGATGGACCTGTATCTGAAATTTTCCGCAAGACATCAAAAGAATTTGTTGTTGGCGCTGAGTCAGAGGTGGCATCTGTAACAACATTATATTCTGTGGTGGGTAGAAATGCAGATGCACTCGCGCTTTATTTTGGTGAGGATCCTGCCCGTTGCCCATTTGAGCAAGTTACTGCAACTCTCCTCAATTTTATAAGGCTGTTTCGTAAAGCACATGAAGAAAATTGTAAACAAGCAGAGTTAGAGAAGAAGAAAGCTGAGAAAGAGGCTGAAATGGAGAAGGCTAAGGGCGTTAACTTGACAAAGAAAAGTGCAAGATAG 4722 0.4549 MEVLGTSFEDMRRKKKMNILSTKREQYIPRHFVALTIASAFLFLDALLPFGSSASLLFLKFAAALALTFSRRFLGSIGEILLAVNRLIGLDPIGVKTAPSDGAVQKVLLPEAAGSASGDLRETVFQSETVFDCCFSTDVLEEDEYKVYMGGIVAQLQDHFPDASFMVFNFREGEKRSQISDILSQYDMTVMEYPRQYESCPLLPLEMIHHFLRSSESWLSLEGQQNVLLMHCERGGWPVLAFMLAGLLLYRKQYNGEQKTLEMVYKQAPKELLHLLSPLNPQPSHLRYLQYISKRNMGSEWPPSDTPLYLDCLILRVLPLLDGGKGCRPVVRLYGQDPSKLVNRSSKLLFSTSKNKKHVRLYQQAECTLVKIDIQCRVQGDVVLECIHTDDDFSREEMMFRVMFHTAFVRSNILELNRDEVDILWDSKDQFPRDFKAEVLFLDADAVMPNLTRVRASEDANETGTASPEEFYEVEEIFSNVVDVQEGKVDYDSLLAHDSVIDDQNQKEVWKEDFDPPTFQECTSDDRTYKQDRRMDSGSNAVKDIVVDDVKYRLDESVDFNNHEVKDIAVDDGEIKNTSTVVTTDIVMEMKDVNEDIPGQLEDMNNKYDEFGNAIEKKLDSKEGQQKHDFSRQKSDKVPPVAKKQLLSNSKPVGDTFIAKQKIKQLESQGSLAKQAKPNAVTRWIPPNKGSYTNSMHVYYPPSRYNSAPAALSNANSSKEKTIDAKSSSASAPIASGTPVSSDKTNGLECQKVDVPKSADSIAEMEEENLPSIKATCLQTPSQAPLSSSTQGLQSTPTPPPPPPPPPPSPPPSFHAKNSMAYAFETSSVSGQNQEMDLQPATSSSPPLPPPPPPFTNGTITPGVFGMSSVVAPPTPPSRPSPPPPPPPPPRYGLSISLPPPPPPPPLSSRGISPLLSTPTSPPQSSPSPTQSLPFLQQAPPPPPPPLPPPPFSRTSLPPLLSSLSKAPPPPPPSLGRPPPPPPPPPPPLSRALPPPPPPPAPPPSSRAPPPPPPPFSRAQPPPPMHGASTPPPPPPPPLSRGAPPPPPPPPSRGAPPPPPPPPPLSRGVPSPPPPPPSRGAPPPPPPPLNGAPPPPPPPMSRAPPPGGQGPPPPPPPGARAPTPPGPPGGTPPPPPPLGSRGSNSDPRGRGRGLSRPSGGGAVAPRRSSLKPLHWSKVTRALQGSLWEELQRHGEPQIAPEFDFSELESLFSANVPKPAGSGGKSGDRRKSAGSKPDKVHLIDLRRANNTEIMLTKVKMPLSDMMAAVLAMDESILDVDQVENLIKFCPTKEEMELLKGYAGDKENLGKCEQYFLELMKVPRVESKLRVFSFKIQFGSQITEFKKSLNTVNSACEEVRKSVKLKEIMKKILYLGNTLNQGTARGSAVGFKLDSLLKLTDTRASNNKMTLMHYLCKVLAERAPELLDFHLDLVSLEAATKIQLKSLAEEMQAIIKGLEKVKQELAASENDGPVSEIFRKTSKEFVVGAESEVASVTTLYSVVGRNADALALYFGEDPARCPFEQVTATLLNFIRLFRKAHEENCKQAELEKKKAEKEAEMEKAKGVNLTKKSAR 1573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g0089 1573 MobiDBLite consensus disorder prediction 621 646 - -
Lele23g0089 1573 MobiDBLite consensus disorder prediction 709 748 - -
Lele23g0089 1573 SMART PTEN_C2_2 303 443 IPR014020 -
Lele23g0089 1573 Gene3D Protein tyrosine phosphatase superfamily 124 309 IPR029021 -
Lele23g0089 1573 SUPERFAMILY Formin homology 2 domain (FH2 domain) 1236 1563 - -
Lele23g0089 1573 Pfam Formin Homology 2 Domain 1166 1535 IPR015425 -
Lele23g0089 1573 MobiDBLite consensus disorder prediction 709 1170 - -
Lele23g0089 1573 MobiDBLite consensus disorder prediction 1551 1573 - -
Lele23g0089 1573 Gene3D - 310 441 - -
Lele23g0089 1573 SMART it6_source 686 1573 IPR015425 -
Lele23g0089 1573 Coils Coil 1536 1570 - -
Lele23g0089 1573 MobiDBLite consensus disorder prediction 1213 1238 - -
Lele23g0089 1573 MobiDBLite consensus disorder prediction 843 858 - -
Lele23g0089 1573 MobiDBLite consensus disorder prediction 1551 1567 - -
Lele23g0089 1573 MobiDBLite consensus disorder prediction 920 956 - -
Lele23g0089 1573 MobiDBLite consensus disorder prediction 963 1141 - -
Lele23g0089 1573 MobiDBLite consensus disorder prediction 621 639 - -
Lele23g0089 1573 Coils Coil 1442 1469 - -
Lele23g0089 1573 MobiDBLite consensus disorder prediction 773 794 - -
Lele23g0089 1573 FunFam Formin-like protein 1160 1547 - -
Lele23g0089 1573 Pfam C2 domain of PTEN tumour-suppressor protein 305 441 IPR014020 -
Lele23g0089 1573 ProSiteProfiles C2 tensin-type domain profile. 305 444 IPR014020 -
Lele23g0089 1573 ProSiteProfiles Formin homology-2 (FH2) domain profile. 1160 1561 IPR015425 -
Lele23g0089 1573 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 306 441 IPR035892 -
Lele23g0089 1573 MobiDBLite consensus disorder prediction 873 910 - -
Lele23g0089 1573 PANTHER FORMIN-J 1058 1567 - -
Lele23g0089 1573 MobiDBLite consensus disorder prediction 820 842 - -
Lele23g0089 1573 Gene3D Formin, FH2 domain 1162 1547 IPR042201 -
Lele23g0089 1573 MobiDBLite consensus disorder prediction 795 814 - -
Lele23g0089 1573 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 153 293 IPR029021 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g0089 Lele-ChrLele23 585740 595111 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g0089 130 715 FH2 protein (formin) Gene Family AT5G07740 65.136 0.0 764
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele21g1924 21 26408877 26417399 Lele23g0089 23 585740 595111 hybridization
Lele22g1892 22 23723716 23727771 Lele23g0089 23 585740 595111 hybridization