Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g0084 ATGTCAGAGCAGGAAACACGGTCATGGGGCTTCATGTTCGTCTGTTTCTTAATCCTTTTTTCAGGTAAAATTGTTGGCCAAGATATTTTGGACACAGAGAGACAAATTCTGCTAGAGCTGAGAACTTATCTGGACAATCAAACTCGAACAGATCGAGGAAGATACATACTCTGGAACACAAACAGCTCAAATCCGTGCGTGTGGCCAGGAATCTCATGCAGCCCTACAGGGACAACCTCGGAGGCGAGGGTGGTCGGCATAGACCTTTCCGACAGCAGCATCGCCGGCGAGATTTTCCAGAATTTCTCGCAGCTTACAGAGCTCACTCACCTTGATCTTTCCACAAACACCATCACCGGAGAAATCCCAGAGGAACTAAGGCGATGCAGAAACCTCGTATATCTCAATCTCTCCCATAATCTTCTCGAGGGGGAGATGGATTTAACTGGACTAACAAGGTTAGAGACGCTGGACTTGTCGGAAAACAGGCTTCATGGGGATATAGGGTTGAATTTTCCTGCCATTTGTGACAACTTAGCTACTTTGAATGTTTCTGGGAATAACTTCACTGGTTCGATTGATCATTGTTTCGATCAGTGTTTAAAATTGCAGTATTTGGATTTGAGCACTAACAATCTCAGTGGGGGTATTTGGACGGGATTTGCGAGGCTGAAGGAGTTTTCAGTTTCAGAGAACTATCTCACTGGGCATCTGAATGAACAAGCATTCCCAGAAAATTGTAACCTCGAAGTACTCGACGTTTCATTCAATGGTTTTATAGGAAATGCACCGAAGAATGTCAGTAAATGTAAGAATCTAGCGATTCTGAATCTTTCCAGTAACAAATTTTCTGGGGATATCCCCGTTGAATTGGGATCCATCTCAGCCCTCCAAGCATTGTACTTCGCCAACAACACATTCTCAAGAAGCATCCCAGAGGCATTTTCAAACTTGACGAATCTAAAGTTCTTGGATTTGAGCGGAAACGGTTTTGGTGGAGAGATACAAGACACACTTGGGAAGCTCAAGCAGGTAAAATTCCTCCTTTTGTATTCAAATGATTACACAGGAGGATTAAACTCATCAGGGATTCTCAAATTACCCAACATCTCTCGCTTAGACCTTAGTAACAACAGTTTTTCAGGTCCTTTACCGATTGAAATCTCTCAGATGACTTCTCTGAAGTTCTTAATTTTGGCCTATAATCAATTCGCCGGAGCTATTCCTCCTGAGTTTGGAAATTTGCCTCAGCTTCAAGCACTTGATATCTCTTTCAACAATTTAACAGGGCAAATCCCACCAAGCCTGGGAAACTTGGGTTCTCTCTTATGGTTAATGCTTGCAAACAATTCATTGACCGGAGAAATCCCGAAAGAGCTGGGAAACTGCACAAGCTTGCTGTGGCTAAACCTTGAAAACAATGATCTCACTGGGAATTTCCCTCCTGAATTGACCGACATTGGAAGAAACGCCATGGCCACGTTTGAATTGAATCGGAATGAAGTCAATAGAATCCCTGCTGGTTTTGAATGTCTGGCAATGAAGAGATGGATACCTGCAGATTACCCTCCTTTCAGCTTTGTGTATAGCATCCTCACAAGGAAAAATTGCATAAGCATTTGGGATAGATTGCTCAAAGGGTATGGAATTTTCCCGATTTGCTCATCTGGGTCATCTTTTCGATTAAAGGAGATTTCTGGGTACGTTCAGTTGAGCGGGAATAATCTAATAGGAGAAGTTCCTTCAGAAATTGGGAACATGCAAAATTTCAGCATGCTGCACTTGGGGTTGAACAAATTTTCTGGGAAAATCCCCTCGGTGATGGGAAATCTGCCACTTGTGGTGTTGAACATAACGAGAAACAATTTCTCAGGTGAAATTCCATGGGACATAGGAAACCTTCAATGTCTTCGGAATCTGGATTTGTCCTACAACAATTTCTCTGGGACATTCCCGACAAGCTTGAACAACTTGACAGAGCTCAGTAAATTCAACATCTCTTACAATCCCTTTATTTCTGGTACAATCCCACCAACAGGACAATTAGCCACATTCGATGAGGATTCGTATTTGGGAGACCCACTCTTGACCCTACCAAGCTTCATCAATAACGTCCCAGACAACAAAAAAAACACGACCTCTCGTAGAGACCACAAAATCAGAAACAAAAACCCCACGAAACTGTCAATGTTTTTGGCGTTTCTAGCTGTCACACTCGCTCTGTTGGTATTCGGGCTCCTCTCTTTCATAGTATGTTCATTAGCGAAAACCCGTTCACAACACGACCCAGAAGGATACCTATTGGAAGACACAAAAGACCAACAGAACTCCGACAATTCGTCTCATTGGTCATATGACCTAATTAAGGTTATCCATTTGAACAAGATAGCATTCACGCACGCCGACATTCTCAAAGCCACAGGAAACTTCTCGGACAACAGAGTCATAGGAAAGGGCGGGTTTGGCACCGTGTACAGAGGAGTATTCCCTGACGGAATAGAAGTCGCGGTGAAGAAGCTTCAAAGAGAAGGACTCGAAGGAGAAAGAGAGTTCAGAGCAGAAATGGAGGTTCTAAGTGGAAACGGTTTCGGGTGGCCACACCCGAATTTAGTCACACTATACGGGTGGTGCCTAAACGGGTCGGAGAAAATCCTAGTTTACGAATACATGGAAGGAGGAAGCTTGGAAGATGTTGTTACAGACAGAACAAGACTCACTTGGAAGAGGAGGTTAGAGATCGCCATTGACGTGGCTCGAGCATTGGTCTATTTGCACCATGAATGCTTCCCTCCAATTGTTCACAGAGACGTTAAGGCAAGCAACGTGCTCTTGGATAAACATGGGAAGGCTAAAGTCACAGACTTCGGGCTAGCAAGAGTGGTAGAAAATGGAGTGAGTCACGTGACCACCATGGTCGCCGGGACGGTGGGGTACGTGGCACCGGAATATGGTCAGACCTGGAAGGCGACAACGAAAGGTGATGTGTACAGCTTTGGAGTGTTGGCTATGGAGTTAGCCACCGGAAGGAGGGCGGTGGATGGTGGAGAGGAGTGCCTGTTGGAGTGGGCTCGACGAGTCACGGGCTATGGATATGGGTTTGGGCCTGGGCTAAGTCGGCCCATGATACCAGTCTTGTTGATGGGCTCTGGGCTGGGAGAGGGAGCGGAGGAGATGGGTGAGTTGTTAAGGATTGGGATGAAGTGCACGGCGGAGGCACCGCAAGCTAGGCCCAATATGAAGGAGGTTTTGTCGATGCTCATTAACATATTGAACCCAAAAAAATAA 3285 0.4518 MSEQETRSWGFMFVCFLILFSGKIVGQDILDTERQILLELRTYLDNQTRTDRGRYILWNTNSSNPCVWPGISCSPTGTTSEARVVGIDLSDSSIAGEIFQNFSQLTELTHLDLSTNTITGEIPEELRRCRNLVYLNLSHNLLEGEMDLTGLTRLETLDLSENRLHGDIGLNFPAICDNLATLNVSGNNFTGSIDHCFDQCLKLQYLDLSTNNLSGGIWTGFARLKEFSVSENYLTGHLNEQAFPENCNLEVLDVSFNGFIGNAPKNVSKCKNLAILNLSSNKFSGDIPVELGSISALQALYFANNTFSRSIPEAFSNLTNLKFLDLSGNGFGGEIQDTLGKLKQVKFLLLYSNDYTGGLNSSGILKLPNISRLDLSNNSFSGPLPIEISQMTSLKFLILAYNQFAGAIPPEFGNLPQLQALDISFNNLTGQIPPSLGNLGSLLWLMLANNSLTGEIPKELGNCTSLLWLNLENNDLTGNFPPELTDIGRNAMATFELNRNEVNRIPAGFECLAMKRWIPADYPPFSFVYSILTRKNCISIWDRLLKGYGIFPICSSGSSFRLKEISGYVQLSGNNLIGEVPSEIGNMQNFSMLHLGLNKFSGKIPSVMGNLPLVVLNITRNNFSGEIPWDIGNLQCLRNLDLSYNNFSGTFPTSLNNLTELSKFNISYNPFISGTIPPTGQLATFDEDSYLGDPLLTLPSFINNVPDNKKNTTSRRDHKIRNKNPTKLSMFLAFLAVTLALLVFGLLSFIVCSLAKTRSQHDPEGYLLEDTKDQQNSDNSSHWSYDLIKVIHLNKIAFTHADILKATGNFSDNRVIGKGGFGTVYRGVFPDGIEVAVKKLQREGLEGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLNGSEKILVYEYMEGGSLEDVVTDRTRLTWKRRLEIAIDVARALVYLHHECFPPIVHRDVKASNVLLDKHGKAKVTDFGLARVVENGVSHVTTMVAGTVGYVAPEYGQTWKATTKGDVYSFGVLAMELATGRRAVDGGEECLLEWARRVTGYGYGFGPGLSRPMIPVLLMGSGLGEGAEEMGELLRIGMKCTAEAPQARPNMKEVLSMLINILNPKK 1094
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g0084 1094 Pfam Protein kinase domain 811 1013 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele23g0084 1094 FunFam Leucine-rich repeat receptor protein kinase MSP1 772 889 - -
Lele23g0084 1094 SUPERFAMILY Protein kinase-like (PK-like) 784 1086 IPR011009 -
Lele23g0084 1094 Gene3D Phosphorylase Kinase; domain 1 771 889 - -
Lele23g0084 1094 ProSitePatterns Serine/Threonine protein kinases active-site signature. 932 944 IPR008271 GO:0004672|GO:0006468
Lele23g0084 1094 SUPERFAMILY L domain-like 569 677 - -
Lele23g0084 1094 FunFam Leucine-rich repeat receptor-like protein kinase 890 1094 - -
Lele23g0084 1094 Pfam Leucine rich repeat 416 476 IPR001611 GO:0005515
Lele23g0084 1094 Pfam Leucine rich repeat 100 142 IPR001611 GO:0005515
Lele23g0084 1094 Pfam Leucine rich repeat 272 330 IPR001611 GO:0005515
Lele23g0084 1094 Pfam Leucine rich repeat 153 213 IPR001611 GO:0005515
Lele23g0084 1094 SMART LRR_typ_2 105 129 IPR003591 -
Lele23g0084 1094 SMART LRR_typ_2 391 414 IPR003591 -
Lele23g0084 1094 SMART LRR_typ_2 415 438 IPR003591 -
Lele23g0084 1094 SMART LRR_typ_2 151 171 IPR003591 -
Lele23g0084 1094 SMART LRR_typ_2 634 658 IPR003591 -
Lele23g0084 1094 SMART LRR_typ_2 439 463 IPR003591 -
Lele23g0084 1094 SMART LRR_typ_2 294 317 IPR003591 -
Lele23g0084 1094 SMART LRR_typ_2 318 342 IPR003591 -
Lele23g0084 1094 FunFam Putative LRR receptor-like serine/threonine-protein kinase 342 503 - -
Lele23g0084 1094 CDD STKc_IRAK 816 1089 - -
Lele23g0084 1094 SUPERFAMILY RNI-like 83 289 - -
Lele23g0084 1094 ProSiteProfiles Leucine-rich repeat profile. 131 152 IPR001611 GO:0005515
Lele23g0084 1094 FunFam Putative LRR receptor-like serine/threonine-protein kinase 562 709 - -
Lele23g0084 1094 SUPERFAMILY L domain-like 222 482 - -
Lele23g0084 1094 Gene3D Ribonuclease Inhibitor 244 334 IPR032675 -
Lele23g0084 1094 Gene3D Ribonuclease Inhibitor 433 515 IPR032675 -
Lele23g0084 1094 Gene3D Ribonuclease Inhibitor 335 432 IPR032675 -
Lele23g0084 1094 Gene3D Ribonuclease Inhibitor 29 172 IPR032675 -
Lele23g0084 1094 Gene3D Transferase(Phosphotransferase) domain 1 890 1094 - -
Lele23g0084 1094 PRINTS Leucine-rich repeat signature 108 121 - -
Lele23g0084 1094 PRINTS Leucine-rich repeat signature 151 164 - -
Lele23g0084 1094 Pfam Leucine rich repeat N-terminal domain 31 74 IPR013210 -
Lele23g0084 1094 ProSiteProfiles Protein kinase domain profile. 810 1090 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele23g0084 1094 ProSitePatterns Protein kinases ATP-binding region signature. 816 839 IPR017441 GO:0005524
Lele23g0084 1094 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 269 1087 - -
Lele23g0084 1094 FunFam Calmodulin-binding receptor kinase CaMRLK 222 337 - -
Lele23g0084 1094 Gene3D Ribonuclease Inhibitor 555 714 IPR032675 -
Lele23g0084 1094 Gene3D Ribonuclease Inhibitor 173 243 IPR032675 -
Lele23g0084 1094 Pfam Leucine Rich repeat 246 262 IPR001611 GO:0005515
Lele23g0084 1094 SMART serkin_6 810 1086 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g0084 Lele-ChrLele23 539881 543482 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g0084 11 1086 Receptor kinase-like Gene Family AT1G55610 31.026 1.77e-147 470
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-2 Lele23g0084 Pkinase 6.2e-45 CL0016