Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g0076 ATGTCTGGTTTGAGGAAATCTCCCCTAAAATTTGTTAAACATAGTTCTGTTGAGCCTGTCTATCCTGTTAAATCGGGATCAAATCCATTTGATTCTGATGATGACGAGCCAAAGGAAAACCAAAAAAATAATTCCTCGAGTAGGACATCTTCAGACCCTTCCCTAGTTTTACAAGGAGGAAAAACCAATCCCTTTGATGATGATGATGGGGGCCATAGGAACTCTTCTTCATCTTCTTATGCCATTCGATCAGCAAACCGAAACAAGTATAGGAATGATTTTCGTGACTCAGGAGGAATAGAGAATCAATCAGTGCAAGAATTGGAGAATTATGCTGTTTACAAGGCTGAAGAGACTACAAAATCAGTCAATAACTGTTTGACGATAGCAGAGGGGATAAGAGAGGATGGTACCAAGACTTTAGTCACTCTACACCAGCAGGGTGAGCAAATTACCAGGTCTCACAATGTTGCAGTTGACATCGACCAAGATCTTAGTCGGGGAGAAAGGCTTTTAGGAAGTCTTGGTGGCATCTTTTCCAAAACTTGGAAACCAAAGAAGACACGACCAATTACAGGCCCTGTTATTGTTGGAGATGATCAGGTCCGAAGAAAGGGCAGCCACTTGGAGCGGAGAGAGAAATTGGGATTGACTTCTGCACCCAGAGGGAAGTCAAACTCTCGAACACCACCTCCTGAGCCAACCAATGCTCTTGAAAAAGTTGAGATTGAAAACGGGAAACAAGATGACGCATTGTCAGATTTAAGCGATCTGTTGGGAGAGCTGAAAGATATGGCTATTGACATGGGATCTGAAATTAAGAGCCACAACAAAGCGCTTGGCCATATGTACAACGATGTGGACGAGTTGAATTACCGCATGAAAGGGGCTAATCAACGTGGTCGCCTTCTACTGAGAAAATAA 924 0.4297 MSGLRKSPLKFVKHSSVEPVYPVKSGSNPFDSDDDEPKENQKNNSSSRTSSDPSLVLQGGKTNPFDDDDGGHRNSSSSSYAIRSANRNKYRNDFRDSGGIENQSVQELENYAVYKAEETTKSVNNCLTIAEGIREDGTKTLVTLHQQGEQITRSHNVAVDIDQDLSRGERLLGSLGGIFSKTWKPKKTRPITGPVIVGDDQVRRKGSHLERREKLGLTSAPRGKSNSRTPPPEPTNALEKVEIENGKQDDALSDLSDLLGELKDMAIDMGSEIKSHNKALGHMYNDVDELNYRMKGANQRGRLLLRK 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g0076 307 MobiDBLite consensus disorder prediction 203 218 - -
Lele23g0076 307 PANTHER SYNAPTOSOMAL ASSOCIATED PROTEIN 27 306 - -
Lele23g0076 307 SMART tSNARE_6 108 175 IPR000727 -
Lele23g0076 307 SMART tSNARE_6 237 304 IPR000727 -
Lele23g0076 307 FunFam SNAP25 homologous protein SNAP33 239 306 - -
Lele23g0076 307 FunFam SNAP25 homologous protein SNAP33 99 176 - -
Lele23g0076 307 MobiDBLite consensus disorder prediction 43 58 - -
Lele23g0076 307 CDD SNARE_Qc 247 302 - -
Lele23g0076 307 MobiDBLite consensus disorder prediction 203 236 - -
Lele23g0076 307 MobiDBLite consensus disorder prediction 1 83 - -
Lele23g0076 307 Gene3D - 240 305 - -
Lele23g0076 307 CDD SNARE_SNAP25N_23N_29N_SEC9N 110 174 IPR044766 GO:0005484|GO:0031201
Lele23g0076 307 SUPERFAMILY SNARE fusion complex 245 304 - -
Lele23g0076 307 SUPERFAMILY SNARE fusion complex 103 173 - -
Lele23g0076 307 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 247 304 IPR000727 -
Lele23g0076 307 Gene3D - 99 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g0076 Lele-ChrLele23 505436 507336 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele23g0076 23 505436 507336 Lele23g0076 23 505436 507336 ECH
Lele21g1935 21 26487214 26489097 Lele23g0076 23 505436 507336 hybridization
Lele22g1902 22 23795395 23797796 Lele23g0076 23 505436 507336 hybridization