Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g0047 ATGATGACTGGAAATTCAAGAAAAGGTTATCAAGGGAAGCAAGAGGAAGATAGTAGTAGTGCTCATCATCATCATCAACAACAACAACACATGATTAGTAACAGTATTGAGAGGTTGTACAGCAAGGTAGGGTCTTCGTCTTCCTCTTCAAGACAATGGTCTGGTCTGAGAAACCCAAGAATCGTGCGAGTGTCAAGGTCTTTTGGAGGCAAAGATAGGCACAGCAAAGTCTGCACCATTAGAGGGCTTAGAGACAGAAGAATCAGGCTTTCTGTGCCCACAGCGATTCAGCTCTATGAGCTTCAAGATAGGCTTGGACTGAACCAACCCAGTAAGGTCATTGATTGGCTCATTGAAGCCACAAAACAAGACATTGATAAGCTCCCACCTCTTCCAATCCCTTTCGGTTTCCCCCAATTTCATCCCCAACACAACCAAACCCTACTTCCTGATCATGAATCCAGTTCTTCCTCTCATCATCACCAGTTTGGAGCTTTCTTTGATGCTAATAATAATAATAGCACGGCTACTTGCATGGATGCAGTGTCGAGGCTAAAAGGAAAAGAGTTTGATGAAAGAGGTAAGTGGGTGATGAAGGCAAACAATGAAGAAGACGGAATTGGTGGTTCTGCTCAGAATCTTTTCCCATCTGGGAATGCTAATTCTTCTCACTCTTGTTTACCCATGACGTCGTATTATAATAATCCCTTCCATTCCGAGCCTTCAAATTTTCTATCTTTATTTGGAAGCCATGGTGTGTTCCCTAATAGTAGTAATAATAATAACCATCACCAGGTAGATCCTGCAGGCCATACTTGTTTGCAGTTTCCATCTTCCTCGTCAGCAGCTGTTTCCCAAGTGTTGTTCTGTCCAAGTAATAATTCATCTGCAACAACAACGCCATCACTTTTTGCTACTCCTTATTATGCTCCATATTCCTCAGTGTCACTGGAAACAGACCCAAGAATGCAACAATTGAACCATATTCAGTTGATGAGCTCATCCAATCCTCATCTTCATCATCCTCTCCTTCTTCCATCTCTGAAACCCCTTATTCCAACACCGCCTTTTAGTTCCAGGCTTCTTGATTCAAATGATAAGGATGATACCACTCCTTCTTGA 1122 0.4242 MMTGNSRKGYQGKQEEDSSSAHHHHQQQQHMISNSIERLYSKVGSSSSSSRQWSGLRNPRIVRVSRSFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYELQDRLGLNQPSKVIDWLIEATKQDIDKLPPLPIPFGFPQFHPQHNQTLLPDHESSSSSHHHQFGAFFDANNNNSTATCMDAVSRLKGKEFDERGKWVMKANNEEDGIGGSAQNLFPSGNANSSHSCLPMTSYYNNPFHSEPSNFLSLFGSHGVFPNSSNNNNHHQVDPAGHTCLQFPSSSSAAVSQVLFCPSNNSSATTTPSLFATPYYAPYSSVSLETDPRMQQLNHIQLMSSSNPHLHHPLLLPSLKPLIPTPPFSSRLLDSNDKDDTTPS 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g0047 373 Pfam TCP family transcription factor 70 187 IPR017887 -
Lele23g0047 373 ProSiteProfiles TCP domain profile. 70 128 IPR017887 -
Lele23g0047 373 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 21 311 IPR005333 GO:0003700
Lele23g0047 373 MobiDBLite consensus disorder prediction 10 24 - -
Lele23g0047 373 MobiDBLite consensus disorder prediction 1 31 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g0047 Lele-ChrLele23 313654 314775 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g0047 11 295 TCP Transcription Factor Family AT5G60970 39.583 4.74e-49 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Lele23g0047 TCP 2.7e-26 No_clan