Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g0044 ATGGGCTCAACAAGTGAAACAGCTCCTCTCTTACAGCGCAAGGAAGAAGGAAAGAGCAACAGAACCCCATTGAATGAACTGACAGACCTTGAACGAGGTGGTGCAGTAGCAAATGTGGGATTTGGCAGGGTGCTTTCACTTGCAAAGCCTGAAGCTGGGAAGCTGATATTCGCAACACTGGCTCTTTTAATTGCATCCACATCAGATATTTTAATTCCAAAATTTAGTGGGAAGATAATTGATATCGTCTCAGGAGATATTCAAACTCCCGAAGATAAAGCTAAAGCTTTGGAAGCTGTCAGGAACACTATACTGTACATTTTTCTGATTGTTGTTGTTGGATCAGTTTCAACAGCACTTGATGGTGGGCTTTTTTCCTCAGCTAGTGAAAGGGTTGTTGCTCGGCTTAGAGAAAGATTATTTAGTCACCTCATAATCCAGGAGATAGCCTTCTTTGATGTTACCCGTACCGGGGAACTTATGAGCAGGATATCTGAAGATACACAGATCATAAAAGATGCAGCAACTACCAATCTTTCTCATGCGCTGAGTTGCTTATCGACTGCATTTATTGGTCTTGGCTTCATGTTTTTGACGTCATGGAAGTTAACATTGTTGGCTTTAGCTGTTGTGCCTGCTACTTTTATAGCTGCACGTAAATTTGGTTGGTTCCTGCGTGAACTTTCTCAGAAAACTCAAGATGCAGCTGCAGCAGCTGCTTCAATAGCTGAGGAATCCTTTGGTGCCATAAGGACGGTAAGATCTTTCGCCCAAGAAAAATATGAAATATCTCGCTACTCTAAGAAAGTTGATGAGACACTTAAGCTTGGACTTAAACAAGCTAAAGTTGAGGGACTCTTTTCTGGAGGCATCTATACAGCAATTTCACTGCCAATTATTGTAATTGTTATCTATGGGGCTTATTTGAAAATTACAGATTCCATGTCCCCTGGTGATCTTACGTCTTTCATTCTTTATAGTCTCACAGTGGGGCCTTCTATATCTGGCCTCTCAGGATTGTATACCATAGCTATGAAAGCTGTGGGTGCAAGCAGACGGGTGTTTCACCTTCTTGATCGTGTATCATCAATGCCAAGGTCGGGAAGTAAATGTCCTCTGGGAGAACAAGATGGTGAGGTGGAGCTAGATGATGTCTGGTTTGCATATCCATCTCGTCCCAGTCATATGGTACTTAAGGCAATTACAATGAAATTGGAGCCTGGCTCAAAGGTTGCTCTTGTTGGTCCAAGTGGTGGTGGAAAGACTACAATAGCAAACTTAATTGAAAGATTTTATGACCCAACCAAGGGACAGATCCTGCTAAATGGGGTTCCACTGGTAGAAGTTTCACATAAGCATCTTCACAAGAAGATCAGTATTGTGAGTCAGGAGCCTGTACTTTTCAACTGCTCCATTGAGGAGAACATAGCTTATGGATTTGATGGCAAAGTTAATCCTGCTGATATAGAAAATGCAGCTAAAATGGCAAATGCACATGACTTCATATCAAAATTCACAGATAAATACCAGACCCATGTTGGGGAGCGTGGGGTAAGACTTTCAGGAGGGCAGAAACAGAGAATAGCAATCGCCAGAGCTTTGCTTATGGACCCAAAAGTTCTTCTCCTGGATGAAGCCACTGGCGCCCTGGATGCTGAAAGCGAATATTTAGTACAGGATGCTATGGAACGACTGATGAAGGGAAGGACAGTTCTAGTTATTGCTCACAGGCTATCAACTGTGAAGAGTGCAGACACAGTTGTAGTTGTTTGTGATGGTGAAATTGTGGAGAGTGGCAGCCATGAACACCTTCTCAACAACATTAATGGTGTCTATTCTGCATTAGTCAGCAGACAGCTACAAACAATGAAACCTCAATATCTTATTGGAAGAGCTTTCGGACCTGAATACGTGCTGAAGTTGTATCTTGCTGGGTCGGTTGGTGGTTCAGTTTTTTACTTGGCCCATCAAGCCTATAAGGCAGTAATGTCAAAGGGTTGGAAGCGTCTGGAGGTTTCAAAACATCGAGCATGGGGTGCTACTGGAGCTGTGAATGCAATCATGCTACTTAGTATATTCTTCTTTCCGAGGGCAACCATTTATGTTGACTTTATAATACCAGTTCCTGCTATCTTGCTGGGAGACACTCGTATACCAGGATCTGCACATTTGGGGGGTGCTACCGTTGCAGCCATTGCTTGGGCCCGAATGCGGAAAGGAAGATTCTGA 2229 0.4316 MGSTSETAPLLQRKEEGKSNRTPLNELTDLERGGAVANVGFGRVLSLAKPEAGKLIFATLALLIASTSDILIPKFSGKIIDIVSGDIQTPEDKAKALEAVRNTILYIFLIVVVGSVSTALDGGLFSSASERVVARLRERLFSHLIIQEIAFFDVTRTGELMSRISEDTQIIKDAATTNLSHALSCLSTAFIGLGFMFLTSWKLTLLALAVVPATFIAARKFGWFLRELSQKTQDAAAAAASIAEESFGAIRTVRSFAQEKYEISRYSKKVDETLKLGLKQAKVEGLFSGGIYTAISLPIIVIVIYGAYLKITDSMSPGDLTSFILYSLTVGPSISGLSGLYTIAMKAVGASRRVFHLLDRVSSMPRSGSKCPLGEQDGEVELDDVWFAYPSRPSHMVLKAITMKLEPGSKVALVGPSGGGKTTIANLIERFYDPTKGQILLNGVPLVEVSHKHLHKKISIVSQEPVLFNCSIEENIAYGFDGKVNPADIENAAKMANAHDFISKFTDKYQTHVGERGVRLSGGQKQRIAIARALLMDPKVLLLDEATGALDAESEYLVQDAMERLMKGRTVLVIAHRLSTVKSADTVVVVCDGEIVESGSHEHLLNNINGVYSALVSRQLQTMKPQYLIGRAFGPEYVLKLYLAGSVGGSVFYLAHQAYKAVMSKGWKRLEVSKHRAWGATGAVNAIMLLSIFFFPRATIYVDFIIPVPAILLGDTRIPGSAHLGGATVAAIAWARMRKGRF 742
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g0044 742 FunFam ABC transporter B family member 25 378 621 - -
Lele23g0044 742 Pfam ABC transporter transmembrane region 55 329 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele23g0044 742 PIRSF ABC_prm/ATPase_B 3 631 - -
Lele23g0044 742 ProSitePatterns ABC transporters family signature. 520 534 IPR017871 GO:0005524|GO:0016887
Lele23g0044 742 SMART AAA_5 407 594 IPR003593 -
Lele23g0044 742 CDD ABC_6TM_AtABCB27_like 58 354 - -
Lele23g0044 742 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 380 617 IPR003439 GO:0005524
Lele23g0044 742 SUPERFAMILY ABC transporter transmembrane region 43 359 IPR036640 GO:0005524|GO:0016020
Lele23g0044 742 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 372 619 IPR027417 -
Lele23g0044 742 MobiDBLite consensus disorder prediction 1 25 - -
Lele23g0044 742 PANTHER ATP-DEPENDENT PERMEASE MDL1, MITOCHONDRIAL 31 623 - -
Lele23g0044 742 CDD ABC_MTABC3_MDL1_MDL2 380 619 - -
Lele23g0044 742 Pfam ABC transporter 398 547 IPR003439 GO:0005524
Lele23g0044 742 SUPERFAMILY Rhomboid-like 628 737 IPR035952 -
Lele23g0044 742 Gene3D ABC transporter type 1, transmembrane domain 105 377 IPR036640 GO:0005524|GO:0016020
Lele23g0044 742 FunFam ABC transporter B family member 25 107 377 - -
Lele23g0044 742 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 56 346 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele23g0044 742 Pfam Rhomboid family 631 729 IPR022764 GO:0004252|GO:0016020
Lele23g0044 742 Gene3D - 378 623 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g0044 Lele-ChrLele23 277331 286273 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g0044 106 634 Calmodulin-binding Proteins AT2G36910 34.630 6.47e-87 296
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele23g0044 23 277331 286273 Lele23g0044 23 277331 286273 ECH