Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g0039 ATGAAAATACAGGAGCGTCTGCTAGAGAAGAAGATCAGTTGGAGAATTCATCGAATGTACTTACGAAATTTTACTTGTACGTACATGGCTGCCGATATCTTCCAGAGACTCCTCTTCGCCACCGTCGAACATATCTTCGCACTAATAATAATTGCCGCTTTGCTTTGGCAACTTTACTGTTGCTTTTATCACATCCGCCTCCGCCGCCGCAATCGCAGTCGTTTTACTTCCGATTACATTCCCTCTCCTCCTCCTCCTCCTCCTCTCACCCGTCCCCTTGATCCTTCACTTTTCGAGTTCCTTCCCACCTTCACCCACTCCTCCTCCGCCGCCGACGCATGTGCCATCTGCTTGAATGAGTTCCAAGGAGGCGACAGTGGGCGGGTGCTCCCGAACTGCGACCACTTCTTTCACCTCAATTGCGTCGATAAGTGGCTCCGAGAAGAGTCTTCGACTTGCCCAGTGTGCCGAAAGGTCGTCGATCCGCCGCGGAGAATCATGTCACGGCATGAAAATACAGAAACGTCTGCCGGAGAAGAGGGTCAGTTAGAGAATTCGTTGAATATAAATCTTCCTCCGCCAATTAGGTGTCCCGAGAACACATTGCAGGGGACAGAATTAGAAGGAGTAGCAATAGAGATTCCTGAGGCAGAGAGCACGTTGTCGCACGGTTCGTAG 678 0.5059 MKIQERLLEKKISWRIHRMYLRNFTCTYMAADIFQRLLFATVEHIFALIIIAALLWQLYCCFYHIRLRRRNRSRFTSDYIPSPPPPPPLTRPLDPSLFEFLPTFTHSSSAADACAICLNEFQGGDSGRVLPNCDHFFHLNCVDKWLREESSTCPVCRKVVDPPRRIMSRHENTETSAGEEGQLENSLNINLPPPIRCPENTLQGTELEGVAIEIPEAESTLSHGS 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g0039 225 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 97 163 IPR013083 -
Lele23g0039 225 MobiDBLite consensus disorder prediction 167 191 - -
Lele23g0039 225 SMART ringv_2 113 157 IPR011016 GO:0008270
Lele23g0039 225 Pfam Ring finger domain 113 157 IPR001841 -
Lele23g0039 225 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 44 161 IPR044675 -
Lele23g0039 225 SMART ring_2 114 156 IPR001841 -
Lele23g0039 225 ProSiteProfiles Zinc finger RING-type profile. 114 157 IPR001841 -
Lele23g0039 225 SUPERFAMILY RING/U-box 113 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g0039 Lele-ChrLele23 248585 249933 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g0039 57 212 Rapid Response to Elicitors AT4G15975 32.704 9.28e-22 88.2