Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g0038 ATGGAGTCTTGGAGATACGGCTCTGGAGATAAGGGTTTTGCGCCCAATAATACACTTCCACCTCCTAATACGTTTGCGAGAAGCAAAAATTCCTTCCTGGAAATGTTGGGTAAACAGTTATCTAATGATCCACTTGGCTGTATTATGAATGATCCAAATTCTTTTTCTGAAGGTGAAGACTCTGCTTCGAAGCTCTCAAACTCTGTAGTTGAATCTAACAGCCGGGATTCCCTCATTGATTTGAAGTTAGGACGAGTTGGTGATGAAAGAGATGCCAATGAATCGCCATTTTCCAAAGGTATTTCTCTTTTGTGTTCTTTAGAGTCATCTACGATCCCAAAGAGATTGAGAACTTCCGCTGTTCAGTCACAAACTGCTTACTGCCAAGCATATGGCTACAACAAGGATCTAAGCGCCTCTAAAGACTACCACAAGAGGCACAAAGTTTGTGAGGTTCACTCCAAGACTGCTAAAGTCTTAGTGAATGGCATAGAGCAAAGGTTTTGTCAACAGTGTAGCAGGTTGGTCAATTTCTCCGTCTTTCACCTTTCAACTCCTTTTGATTGCCGACAGTCCTGA 579 0.4231 MESWRYGSGDKGFAPNNTLPPPNTFARSKNSFLEMLGKQLSNDPLGCIMNDPNSFSEGEDSASKLSNSVVESNSRDSLIDLKLGRVGDERDANESPFSKGISLLCSLESSTIPKRLRTSAVQSQTAYCQAYGYNKDLSASKDYHKRHKVCEVHSKTAKVLVNGIEQRFCQQCSRLVNFSVFHLSTPFDCRQS 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g0038 192 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 71 188 IPR044817 GO:0003677
Lele23g0038 192 MobiDBLite consensus disorder prediction 44 69 - -
Lele23g0038 192 Gene3D - 124 188 IPR036893 GO:0003677|GO:0005634
Lele23g0038 192 ProSiteProfiles Zinc finger SBP-type profile. 125 192 IPR004333 GO:0003677
Lele23g0038 192 SUPERFAMILY SBT domain 126 182 IPR036893 GO:0003677|GO:0005634
Lele23g0038 192 MobiDBLite consensus disorder prediction 46 69 - -
Lele23g0038 192 Pfam SBP domain 128 182 IPR004333 GO:0003677
Lele23g0038 192 MobiDBLite consensus disorder prediction 1 26 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g0038 Lele-ChrLele23 243492 244147 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g0038 1 188 SBP-box Gene Family AT1G69170 38.308 3.36e-29 110
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Lele23g0038 SBP 3.9e-16 No_clan