Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g0030 ATGGAACCAGGGTTGGTTTTGAGCGAAATGCAGGAAATGCATTCCATCGCAGGAGGTAGATTGTTCAGCGCCTCGGGTGCCGCTGGTGACAGGAAGCTCAGGCCTCACCATCACACTCACAACAACGACAGCCAGAACCGCCCGCCGTTGAAGTGCCCGAGGTGTGACTCCCTCAACACCAAGTTCTGCTATTACAACAACTACAACCTCTCTCAGCCGCGCCACTTCTGCAAGAGTTGCCGTAGATACTGGACCAAGGGCGGCGTCCTCCGTAACGTACCCGTCGGCGGCGGTTGCCGGAAATCTAAGTGCTCCAAGCCCAAGAACACTTACTTAGAAACTTGCTCCGCCTCTGCGATAACAGCACCACCGCTGGGGCCGTCCTCATCGCAACCGGAGCGCAAGCGTAAGACGTCCAACTCTCATTCCAGCAGTGAAAACTCCAGTCTTACTGCTGTCGCTGCCGCCGTCACCACAGAAGCGGTCTCAGCTCCTTCATCCAACTCCACGTCCAATAACTTGTTCGACAATCTTCAGGATTCGAACCTGGTCGTCCATTCCAATTCGAAGCCTAGACCGGAACCAGGCGTCACCGAACGAGGAGGAGACTCCGGGATTTTCTCGGAGATAGAAAACTTGACGAGCCTGATCACACCCACTAACGGGACACTGGCGTTCGGATACGGGAATATCACCGACGCGTCGTCGTTTCAGCTGTGCAGCCAGTGGCAGAAAGGGATGGACGCGAGCGATCGTCGTCACCAGGGCATGAAGTGGCCGGAGACGACGACGGGATCGCTGATGGAGCAGACGGTGCCGGTGGATTTGTCGACGGTGGAAAGTAAAATGGGGAACGGAGGATTGGGGCCGCCGGATTGGCCAGGGAGCACGGATCATGAAGGTCTGTTTGGTGTTGGGAACACCGTAGATGAGGGTCTGTGGAATAACAATCAGTGGAATGAGGACAATTCGAGTCTTTTTCATCTGCCTTGA 993 0.5559 MEPGLVLSEMQEMHSIAGGRLFSASGAAGDRKLRPHHHTHNNDSQNRPPLKCPRCDSLNTKFCYYNNYNLSQPRHFCKSCRRYWTKGGVLRNVPVGGGCRKSKCSKPKNTYLETCSASAITAPPLGPSSSQPERKRKTSNSHSSSENSSLTAVAAAVTTEAVSAPSSNSTSNNLFDNLQDSNLVVHSNSKPRPEPGVTERGGDSGIFSEIENLTSLITPTNGTLAFGYGNITDASSFQLCSQWQKGMDASDRRHQGMKWPETTTGSLMEQTVPVDLSTVESKMGNGGLGPPDWPGSTDHEGLFGVGNTVDEGLWNNNQWNEDNSSLFHLP 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g0030 330 MobiDBLite consensus disorder prediction 30 50 - -
Lele23g0030 330 Pfam Dof domain, zinc finger 49 103 IPR003851 GO:0003677|GO:0006355
Lele23g0030 330 MobiDBLite consensus disorder prediction 122 204 - -
Lele23g0030 330 MobiDBLite consensus disorder prediction 30 44 - -
Lele23g0030 330 MobiDBLite consensus disorder prediction 142 188 - -
Lele23g0030 330 ProSitePatterns Zinc finger Dof-type signature. 52 88 IPR003851 GO:0003677|GO:0006355
Lele23g0030 330 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 39 220 IPR045174 GO:0003700|GO:0006355
Lele23g0030 330 ProSiteProfiles Zinc finger Dof-type profile. 50 104 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g0030 Lele-ChrLele23 185949 186941 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g0030 30 327 C2C2-Dof Transcription Factor Family AT5G60850 33.762 2.33e-40 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Lele23g0030 zf-Dof 5.7e-32 No_clan