Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g0026 ATGAAAATCCGATCAGTGAAGCTGAGGGAAGCCCACCAGGCCGCTAGCAATGGCCGGCTTTCTTTCTGCTCCGTCTTGTGGGACCAACAAGCTCAACACCTCGTCACTGCATGCTCTTCCGACGTCTCCATCTCAATCCATGATCCGTTGCTTCTTTCATCTCCCCCGAAGGTTCTCACACACCACCGCGATGGTGTCACCGCTTTGGCTCTTAGCCCCAACTCTACATGTCTTGCTTCCGGATCCGTCGATCACTTCGTGAAGCTATACAAGTTTCCGGGTGGAGAGTTCCAGACTAATATTACCAGGTTTATACTTCCAATACGTTCACTTGCATTTAATAAATCAGGGAGTTTGTTAGCAGCAGCTGGTGATGATGAGGGCATTAAGCTTATCAATACAGTTGATGGTTCTATAGCTCGAGTCCTCAAAGGGCATAAAGGGACTGTCACGGGCTTAGCTTTTGACCCCAATGGTGAATACTTGGCATCTATAGATTCATCTGGAACTGTTATTTATTGGGAACTTCACTCAGGAAGAATAGTTCATAACCTCAAAGGCATTGCTCCTGAAACAAGATCGGATGTATCTTCTATGAATGTTATTTGCTGGAGTCCTGATGGTGAGACCTTGGCTGTTCCAGGGTTAAAAAATGATGTTGTGATGTATGATAGGGATACTGCTGAAAAGTTGTTTTCATTGAAGGGCGATCACACACAACCCATATGTTTCTTGTCTTGGTCACCCAATGGCAAGTACATGGCTACTTCTAGCTTAGATAGGCAGGTTCTAATTTGGGACGTCAATAAAAAGCAGGATATTGATAGGCAAAAATTCAATGAAAGAATATGTTGCATAGCTTGGAAGCCAATAGGTAATGCGTTAGCTATTACTGATGTCATGGGGAAGTTTGGTATCTGGGATTCTGTTATTCCTTCATCCATGAAATCCCCAACAGAGGATATTCCCATGCAATATAAGAATAGTAATGGGCTTCTTTTGTTTGATGAGGAGGATCTGGACCTTTGTGCAAGTGGAAGTATAAGTGATCTTGGTGAAGATAGCGATGGAGAATCGGAACTACCTACCAGGAAAAGATTACGTGAACAGCCTTTGAGTGAGGAAAACTTCGATGAGGACGGCAGTGACGAAATGGCTTTACATTCAAAGGTTGAATCTCATAAAAAACCAAATCGCACACATAAAGAAGATTTAAACAGTTTGAATGTGGGACACAAAAGCTCAATCATAACATGCAAACCAAAGATGCAAGAAGCATTTCAACCAGGATCCACTCCTGCACAGCTTGGGAAAAGGCGCTTTTTGTGCTACACTATGCTTGGAAGTATAACAACAATTGAACATGATGGATACTTCCACATAGAGATTGATTTTCATGACACTGGCAGTAGCCCTCGAGTTCCATCAATGACCGACCATTTTGGATTTACAATGGCTGCCTTAAATGAGAATGGGAGTGTCTTCGCGAATCCTTGCAAGGGGGAGAAGAATATGAGTACTCTCATGTATCGTCCATTTAGTAGTTGGGCAAGTAATAGTGAGTGGTCTATGCGCTTTGAAGGAGAAGAAGTAAAGCTTGTTTCACTTGGTACTGCTTGGGTGGCTGCCGCAACTAGTTTTAACTATCTTCGTATATTTACGGATGGTGGTTTGCAGAGAAATATTATTTCGCTGGATGGGCCAGTGTTGACTGCCTCAGGTTTCAAGGATAAATTGGCAATTGTTACTCATGCCTCTGATTGTGTTTCCTCAAATGATCAGGCGCTAGAGTTCAGAGTATTTAACATACCGAATGAAACCCAGCTCCTTAAAGGCCGCTTGCCGTTGACTCCGGGTTCATCTCTAACATGGTTTGGATTTAGTGAAGAAGGCCAATTGAGTTCGTATGATTCCAAGGGCGTGCTTAGAGTGTTTACAAGTCAGTATGGTGGTAGCTGGCTCCCACTTTTTAGTGCAAGTAAAGAGAAAGATGAAAACTATTGGGTAGTGGGGTTGAATGCAAGCAAGTTATTTTGTGTGATATGCAAGAAACCCGACATCTTCCCACAGGTGATGCCTAAACCGGTTCTCACCCTGCTGAATCTTTCGTTTCCTCTTGCTTCCTCTGATCTGGGATCGGAAGCCCTTGAGAACGAGTTCATAATGAACAACATGCATCTCTTCGAGATTCAGAAAAGAACGGATGAAATGACTGTTGCCGGTCTGGATACCAGTTCGCTTGATGATGAGGCTTTCAATCTCGAAGCAGCACAAGATAGATGCATACTTAGGCTCATAGCATCCTGCTGTAATGGAGATAAGTTCGTGAGAGCCACTGAACTTGTGAAGCTCCTGTCACTGGAGAAATCAATGAAAGGTGCAATTAAACTTGTCACTGCGCTAAAACTTCCCCACTTGGCCGAGAGGTTCAGTAGCATGTTAGAGCAAAGGCTTCTCCATGAAATGAAAAAACCCGCAGATACCAACCGCCGCCAAGATGGCCGTATGACGCCCTTGACAGCTGACGTTTCAAATAGCAGAGGCAAGTTCCTAAATCAGACTGAAACATGGGACACAGTTAGCATGTCGTCATCACCAAAATTATCTGCTCCTTTGTTGACCAAGAAAGCCAAATCACCAGAGGAAGCCAAAGCCGGAATAGATAAGACTGCGGTGGTGAATGAAACTGTGAAGGGGAGGAATACAGTGAATGAGGTAAATGATAGGGAAGGTAAGGTGGGGGAAATACGTCAGGTGCCAGCTCATAATCATCAAGATATCTCTGTAAAGTCGTCAAATAAGCAAGAAGTGAAGAAGTCAGAGGCTAGTATAGCACAACCAAGTCGCCCCTCCAATCCGTTTTTGAAGTCGTCCATCAAGATGGTGACAAAGTATTCAGATGTCACCTACCTTCGCCACCGCGAACCTGACGATGATCCTCGCCTCCCTGACCAGACCCTAACTCTTGATTCTATCCCCTACTGGTCCCACGCCGATTTCGATTTCGACTTCTATCCTTCCGATCCAGAATCCCCCCCGCCCGATTCTCCCCTCCGCCCTCACAACGCCCCTCGTGATCTTGGCTTGTCTCACCGATTTGATTCCACCATCTCTCTACGACGTGACGATAACTTCTCGGACCCCGGTTCGATTCCCTGCACCGATCTACGGGACCGCGAAAACCAGGTAAATTTCGTTATGGATTTGTTTCAGCAGCGTGTTGAGCAATCGCAGGTCATGGGTCACAGCGATTTGGTCGAAGTCCTGGATAATTCTAATATAGGTATTATTGACGGTCATTGCGACCTCGGTGTTGATGATTTGGGTGTGGATTTCGGATTTGGCTTAGGGTTTGGCTTGGATAGGGATTCTTTGCAGGGTGATGACATTAGTGGCTTTATGGTTGAAAATTATGGTTCTGGTGGTGGGGATGGTGACTGTTTTTTCGTTGCAAGGAGGTTTTCTGGATCCGAGTCCGTGGGGACGCCGTCTATGGCAAGCCGAATTCATCCTTTTGACAACTGTATACGGCTCGTGGAGTTCGGGTCAGATTCTGATGAGGAGGAGGATGGGGCTTTGGGTGTGCGCGCCCATTCGGAAGATGAATACAATGTGCATGATGAGAACGACGATGTTGCTAGCATCCCTCTTTGCTGGGATTCATTACAATTGGAGGATAACAGGGATGATACCGAAGATTTTGAGTGGGAAGAAGTTGATGGTCGGGTTGATGAGAGGGAAGTTTTGAGCATGCTCACCGGTGAGGATGATGCGTCTATATCAGTTTCAGTTTCCCCAATAAATGGGCTTGAAGAAGAAGTAAGTGTTATGAGAGCGGGAGGTGTGGAAAATTTGGGTTGGGAAGTGTTGCTGAATGCCAATAATTTGGACACCAACCCTGATTTGGATCACGATGCAGAACCTTATTTTGGTGATCATGATGACTATATTTATACTGCAGAGTACGAAATGATGTTTGGCCAATTCGCTGACAATGAGAATCCCTTGGTTGGTCGGCCTCCAGCTTCCGTATCAGTTGTTCAGAATCTTCCATCAGTGATTGTTGCCAAACAAGATATCTTCAACAATGGTGCACTTTGTGCAGTTTGTAAGGACGAGTTCAATGTTGAAGAACAAGCAAAGCAGTTGCCGTGTTCACATTTCTACCATGGAGAATGCATTATCCCGTGGTTGGGAATTCGGAACACTTGTCCTGTTTGTCGATATGAGTTGCCTACTGATGATGCTGATTATGAGCGTAGGAGGATGCAAAGATCTGGCCGTAGCTTATGA 4293 0.4507 MKIRSVKLREAHQAASNGRLSFCSVLWDQQAQHLVTACSSDVSISIHDPLLLSSPPKVLTHHRDGVTALALSPNSTCLASGSVDHFVKLYKFPGGEFQTNITRFILPIRSLAFNKSGSLLAAAGDDEGIKLINTVDGSIARVLKGHKGTVTGLAFDPNGEYLASIDSSGTVIYWELHSGRIVHNLKGIAPETRSDVSSMNVICWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLKGDHTQPICFLSWSPNGKYMATSSLDRQVLIWDVNKKQDIDRQKFNERICCIAWKPIGNALAITDVMGKFGIWDSVIPSSMKSPTEDIPMQYKNSNGLLLFDEEDLDLCASGSISDLGEDSDGESELPTRKRLREQPLSEENFDEDGSDEMALHSKVESHKKPNRTHKEDLNSLNVGHKSSIITCKPKMQEAFQPGSTPAQLGKRRFLCYTMLGSITTIEHDGYFHIEIDFHDTGSSPRVPSMTDHFGFTMAALNENGSVFANPCKGEKNMSTLMYRPFSSWASNSEWSMRFEGEEVKLVSLGTAWVAAATSFNYLRIFTDGGLQRNIISLDGPVLTASGFKDKLAIVTHASDCVSSNDQALEFRVFNIPNETQLLKGRLPLTPGSSLTWFGFSEEGQLSSYDSKGVLRVFTSQYGGSWLPLFSASKEKDENYWVVGLNASKLFCVICKKPDIFPQVMPKPVLTLLNLSFPLASSDLGSEALENEFIMNNMHLFEIQKRTDEMTVAGLDTSSLDDEAFNLEAAQDRCILRLIASCCNGDKFVRATELVKLLSLEKSMKGAIKLVTALKLPHLAERFSSMLEQRLLHEMKKPADTNRRQDGRMTPLTADVSNSRGKFLNQTETWDTVSMSSSPKLSAPLLTKKAKSPEEAKAGIDKTAVVNETVKGRNTVNEVNDREGKVGEIRQVPAHNHQDISVKSSNKQEVKKSEASIAQPSRPSNPFLKSSIKMVTKYSDVTYLRHREPDDDPRLPDQTLTLDSIPYWSHADFDFDFYPSDPESPPPDSPLRPHNAPRDLGLSHRFDSTISLRRDDNFSDPGSIPCTDLRDRENQVNFVMDLFQQRVEQSQVMGHSDLVEVLDNSNIGIIDGHCDLGVDDLGVDFGFGLGFGLDRDSLQGDDISGFMVENYGSGGGDGDCFFVARRFSGSESVGTPSMASRIHPFDNCIRLVEFGSDSDEEEDGALGVRAHSEDEYNVHDENDDVASIPLCWDSLQLEDNRDDTEDFEWEEVDGRVDEREVLSMLTGEDDASISVSVSPINGLEEEVSVMRAGGVENLGWEVLLNANNLDTNPDLDHDAEPYFGDHDDYIYTAEYEMMFGQFADNENPLVGRPPASVSVVQNLPSVIVAKQDIFNNGALCAVCKDEFNVEEQAKQLPCSHFYHGECIIPWLGIRNTCPVCRYELPTDDADYERRRMQRSGRSL 1430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g0026 1430 Gene3D - 105 325 IPR015943 GO:0005515
Lele23g0026 1430 PANTHER WD REPEAT AND HMG-BOX DNA BINDING PROTEIN 1 960 - -
Lele23g0026 1430 SUPERFAMILY RING/U-box 1348 1414 - -
Lele23g0026 1430 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1328 1414 IPR013083 -
Lele23g0026 1430 Pfam Minichromosome loss protein, Mcl1, middle region 426 706 IPR022100 -
Lele23g0026 1430 CDD RING-H2_RNF126_like 1367 1408 - -
Lele23g0026 1430 ProSiteProfiles Trp-Asp (WD) repeats profile. 59 100 IPR001680 GO:0005515
Lele23g0026 1430 FunFam E3 ubiquitin-protein ligase RING1-like 1328 1414 - -
Lele23g0026 1430 Pfam Anaphase-promoting complex subunit 4 WD40 domain 203 289 IPR024977 -
Lele23g0026 1430 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 235 269 - -
Lele23g0026 1430 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 59 91 - -
Lele23g0026 1430 Gene3D - 3 104 IPR015943 GO:0005515
Lele23g0026 1430 FunFam Transducin family protein / WD-40 repeat family protein 196 323 - -
Lele23g0026 1430 MobiDBLite consensus disorder prediction 357 375 - -
Lele23g0026 1430 MobiDBLite consensus disorder prediction 938 955 - -
Lele23g0026 1430 Pfam WD domain, G-beta repeat 57 90 IPR001680 GO:0005515
Lele23g0026 1430 Pfam WD domain, G-beta repeat 141 174 IPR001680 GO:0005515
Lele23g0026 1430 ProSiteProfiles Trp-Asp (WD) repeats profile. 235 276 IPR001680 GO:0005515
Lele23g0026 1430 ProSitePatterns Trp-Asp (WD) repeats signature. 254 268 IPR019775 -
Lele23g0026 1430 Pfam Ring finger domain 1367 1408 IPR001841 -
Lele23g0026 1430 MobiDBLite consensus disorder prediction 346 384 - -
Lele23g0026 1430 SMART WD40_4 178 224 IPR001680 GO:0005515
Lele23g0026 1430 SMART WD40_4 227 267 IPR001680 GO:0005515
Lele23g0026 1430 SMART WD40_4 270 308 IPR001680 GO:0005515
Lele23g0026 1430 SMART WD40_4 2 48 IPR001680 GO:0005515
Lele23g0026 1430 SMART WD40_4 52 91 IPR001680 GO:0005515
Lele23g0026 1430 SMART WD40_4 136 175 IPR001680 GO:0005515
Lele23g0026 1430 SMART WD40_4 94 133 IPR001680 GO:0005515
Lele23g0026 1430 SUPERFAMILY WD40 repeat-like 25 308 IPR036322 GO:0005515
Lele23g0026 1430 SMART ring_2 1367 1407 IPR001841 -
Lele23g0026 1430 ProSiteProfiles Trp-Asp (WD) repeats profile. 143 184 IPR001680 GO:0005515
Lele23g0026 1430 MobiDBLite consensus disorder prediction 1003 1027 - -
Lele23g0026 1430 CDD WD40 23 308 - -
Lele23g0026 1430 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 143 180 - -
Lele23g0026 1430 MobiDBLite consensus disorder prediction 920 955 - -
Lele23g0026 1430 ProSiteProfiles Zinc finger RING-type profile. 1367 1408 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g0026 Lele-ChrLele23 155077 162541 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g0026 1213 1414 C3H Transcription Factor Family AT5G60820 48.598 3.24e-53 191