Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g0025 ATGGAGGGGAGTACAACCTTAGAGCAACAGCATGTTCACCATCCTTGTCCTTCTCAGAAACCCATTCTAACCTCAAGCTTACTCAACATGGAAACTGGGGAAGGCCATGAAGGTTCTTATGTCTTAGGTCACAGTCAAGGTGTACACTGTATTCCATTTGATTACTCTCAGTTACACCTTCCCAACAACACAATTCTGTTTATAGACCACAAACCCTGTCCCAACACTTCATCAAACAGTAACAACAATGACAACATGAATGATTGTGGCGAAGGGAAGGGTGCTTCTTATGAGAGAAAGAGGAAAAGGATGTTCTCCAACAGAGAATCTGCTCAGAGGTCGAGGATGAGGAAGAAGCAGCAGATAGAAAACCTTCAGTATCAAGTGGATCATCTTCAGACCATGAACCATCAACTTTCCCAGAAGATCATTTACTTGTTGGAATGTAACCAGCAGATCCTCCAGCAGAACAATCAGCTCAAAGAGAAAATTTCTACACTTCAAATGGCCCTCTCTGACTAG 522 0.4291 MEGSTTLEQQHVHHPCPSQKPILTSSLLNMETGEGHEGSYVLGHSQGVHCIPFDYSQLHLPNNTILFIDHKPCPNTSSNSNNNDNMNDCGEGKGASYERKRKRMFSNRESAQRSRMRKKQQIENLQYQVDHLQTMNHQLSQKIIYLLECNQQILQQNNQLKEKISTLQMALSD 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g0025 173 MobiDBLite consensus disorder prediction 93 117 - -
Lele23g0025 173 CDD bZIP_plant_GBF1 100 148 IPR045314 GO:0003700|GO:0006355
Lele23g0025 173 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 102 117 IPR004827 GO:0003700|GO:0006355
Lele23g0025 173 Coils Coil 150 170 - -
Lele23g0025 173 MobiDBLite consensus disorder prediction 1 20 - -
Lele23g0025 173 SUPERFAMILY Leucine zipper domain 99 155 IPR046347 GO:0003700|GO:0006355
Lele23g0025 173 FunFam BZIP transcription factor 97 148 - -
Lele23g0025 173 PANTHER BASIC LEUCINE ZIPPER 43-RELATED 69 173 IPR044521 -
Lele23g0025 173 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 97 160 IPR004827 GO:0003700|GO:0006355
Lele23g0025 173 SMART brlzneu 95 159 IPR004827 GO:0003700|GO:0006355
Lele23g0025 173 Coils Coil 108 142 - -
Lele23g0025 173 Gene3D - 97 152 - -
Lele23g0025 173 Pfam bZIP transcription factor 99 157 IPR004827 GO:0003700|GO:0006355
Lele23g0025 173 MobiDBLite consensus disorder prediction 77 117 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g0025 Lele-ChrLele23 152636 153157 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g0025 95 173 bZIP Transcription Factor Family AT5G60830 60.759 1.17e-26 98.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lele23g0025 bZIP_1 2.8e-12 CL0018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele22g1950 22 24178417 24179034 Lele23g0025 23 152636 153157 hybridization