Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g0015 ATGGCGATGTCGATGGCGAAGCTGAGCATGGACATGCCCTCTCCTCGTACTCTTGTTCCTCCCACTCCCACTTCGCCTCCCTCCCTCCCCTCTCTCCGACGCGCCTCTCTCTCTATTTCCCTCCCCACCTCCACCACCATTTCTCTTTTGGCTCTCTTCCCTCTTCCCTCTGACGCCAAGGCCGTCTCCATCTCCAAGGACCAGATCGTCTCTTCTCTTACTCAAGTGGAGCAAACCATCGATCAAGTTCAGGAGGCCGGTTCCGGTTTCTTCCAAACCACCCAGAGTCTTCTTCAAGCTCTTGCCGATGCTTTGAAGCCTGCCATTGACACCGCCTTACCCGTCGTCCGTCAGGCCGCACAGGAGGCTTTCGAAGTTGCTTCCCCTGCCATCTCCGAGGCTTCCAAAACGGCTCAACAAGCACTACAAAGCTCCGGTCTTGATGCTCAGCCTGTTCTCACTGCCGCCAAGACCGTAGCAGATGCCGCGCAACAAACAGGCAAGGTTATTGAAGACGCCAAGCCAATAGCTTCAACAACTGTCGAAACTATATCTTCTGCAGATCCTGCTGTAATAGCCGGAACAGCCGGAGCAATATTTCTCGCTTATCTCCTGCTACCTCCTGTCTGGTCTCTCGTCTCTTTTAACCTTCGTGGTTATAAAGGCGAGCTTACTCCTGCTCAAACCCTCGATCTTTTATGTACTCAGAACTACATTATGGTTGATATTAGGTCAGAGAAGGACAAGAACAGGGCCGGTATTCCTCGCCTTCCCTCTAACGCCAAAAACAAGATGATTGCCATACCATTGGAAGAACTACCGAGTAAGCTGAGAGGGCTGGTGAGAAATGCGAAGAAAGTAGAAGCTGAAATAGCGGCTCTGAAGATTTCATATCTCAAGAAAGTAAACAAAGGCACCAATATTGTGATCATGGATTCGTACACGGTGTCGGCAAAAATAGTTGCAAGAACGCTGACGAGCCTGGGATTTAAGAAATGCTATATTGTGGCGGATGGGTTTTCTGGGAACAAAGGGTGGTTACAGAGTAGATTAGGAACAGATTCATACAATTTATCGTTTGCGGAGGTACTGTCACCGTCGAGAGTGATCCCTGCCGCAGTGAGCCGCTTTGGGACGACAAGCGGCAAACTTCTTCCTGAATAG 1164 0.5034 MAMSMAKLSMDMPSPRTLVPPTPTSPPSLPSLRRASLSISLPTSTTISLLALFPLPSDAKAVSISKDQIVSSLTQVEQTIDQVQEAGSGFFQTTQSLLQALADALKPAIDTALPVVRQAAQEAFEVASPAISEASKTAQQALQSSGLDAQPVLTAAKTVADAAQQTGKVIEDAKPIASTTVETISSADPAVIAGTAGAIFLAYLLLPPVWSLVSFNLRGYKGELTPAQTLDLLCTQNYIMVDIRSEKDKNRAGIPRLPSNAKNKMIAIPLEELPSKLRGLVRNAKKVEAEIAALKISYLKKVNKGTNIVIMDSYTVSAKIVARTLTSLGFKKCYIVADGFSGNKGWLQSRLGTDSYNLSFAEVLSPSRVIPAAVSRFGTTSGKLLPE 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g0015 387 Gene3D - 221 360 IPR036873 -
Lele23g0015 387 PANTHER RHODANESE/CELL CYCLE CONTROL PHOSPHATASE SUPERFAMILY PROTEIN 54 353 IPR044690 GO:0009704|GO:0071277|GO:0090333
Lele23g0015 387 MobiDBLite consensus disorder prediction 1 30 - -
Lele23g0015 387 Coils Coil 277 297 - -
Lele23g0015 387 ProSiteProfiles Rhodanese domain profile. 234 355 IPR001763 -
Lele23g0015 387 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 201 342 IPR036873 -
Lele23g0015 387 CDD RHOD 228 342 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g0015 Lele-ChrLele23 86913 88700 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g0015 3 313 Sulfurtransferasese or Rhodanese AT5G23060 67.412 4.96e-148 419
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele23g0015 23 86913 88700 Lele23g0015 23 86913 88700 ECH
Lele21g1998 21 26882162 26883938 Lele23g0015 23 86913 88700 hybridization
Lele22g1965 22 24260026 24261876 Lele23g0015 23 86913 88700 hybridization