Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g0011 ATGGCGGGTCATAGAAGAAAGAGGCACCACTTCAGAAGAATCCATGCGTTTACGTGTGGCAAAGCTTCGTTTAGAGGGGAGCATTCGCTCATTGGAGGCCCTGGATTCTCCAGGATAGTGCTATGCAACGAACCAGAACGCGGGGAGGATTATGGCGATAATTACGTGAGAACTACTAAATATACACTTGTCTCTTTCCTCCCGAAGTCGTTATTCGAGCAATTTAGGAGGGTTGCTAACCTCTATTTCCTCGTATGTGCGATCTTGTCCTTCTTCCCCGTTTCTCCTTATTCAGCTGTTAGCAATGTTGTTCCTCTGGTGGTTGTGGTTGCTGTAAGTATGGGCAAAGAGATGGTTGAAGACTGGAAACGCAAACAGCAGGATATTGAGATGAATAACAGAAAGGTTAAAGTACATCGTCGAGTAGGCCCTTTTGATCATTCCAAATGGAGGGATATAAAAGTTGGAGACATAGTAAAGGTGGAAAAAGATGACTTTTTTCCTGCTGACCTCGTCTTACTTTCATCGAGTTATGATGATTCTGCTTGCTATGTTGAGACCATGAATCTTGACGGAGAAACAAATCTTAAGTTGAAACAAGCGCTAGAAGAAACTTCCAAATTGCAAGAAGATTCAAGCTTTCAGAACTTCAAAGCTATAATCAAATGTGAAGATCCAAACGCAAATTTGTACTCCTTCTTGGGCACTCTACAGCTTGAAGATCAACAGTACCCTCTTGCACCTCAGCAGCTTCTTCTTAGGGACTCAAAGCTGAGGAATACCGATTTTATCTATGGTGTGGTAGTCTTTACAGGTCATGATACAAAGGTTATGCAGAATTCAACAGACCCTCCTTCAAAGAGAAGCAAAGTTGAGAAACGAATGGATAAGATAATCTACTTCCTATTCTTTGTCTTATTCATTATTTCTCTTATTGGATCCATTTTCTTTGGAATTTCAACAACGCAAGACCTTGAAAATGGAAGAATAAAAAGATGGTACCTTAGACCAGACAATACTACAGTCTACTATGATCCAAATCAAGCAGCAGTTGCAGCAATTTTACATTTCTTGACCGCCCTCATGTTATATGGTTACTTGATTCCCATTTCCTTGTATGTTTCGATAGAAATCGTGAAAGTTCTTCAGAGCATATTCATTAACCAAGATGCGAACATGTATTACGAAGAAACTGACAGGCCAGCTCATGCTCGAACGTCGAATTTGAATGAAGAACTTGGCCAAGTTTGTACCATACTTTCAGATAAAACAGGAACTTTAACCTGTAATTCTATGGAATTTATCAAGTGTTCCATTGCTGGGGTTTCTTATGGTCGTGGAGTTACAGAAGTTGAGAGAGCTCTAGCTAGAAGAAAAGGATCGCCTTTATTTCAAAATTCGACCGATGAGGATGATCATGTTGCGGGAAAGCCATCCATCAAAGGATTTAACTTTGTAGATGAAAGGATTATGAACGGAAATTGGTTCAATGAGACTCGTGAAAATGAAATCCGGGACTTTCTGCGTTTGCTGGCCGTATGCCATACTGCCGTGCCTGAAGTTGACGAAGAAACAGGTAACATCTCATATGAAGCAGAATCACCAGATGAGGCAGCTTTTGTTATTGCTGCAAGAGAACTAGGTTTCGAATTTTATGAAAGGACACAGACAGCAATTTTGATACGTGAGTTCAACCCCAAATCAAAGATGAAGGAGGAAAGATCCTACAAACTCTTAAACATAATAGAATTTAGCAGTGCAAGAAAGCGGATGTCTGTTATTGTCAGAGATGAGGAAGGGAAACTATTACTACTCTCCAAAGGTGCTGATAGTGTCATGTTTGAAAGACTTGGAAAGAATGGAAGGATGTTTGAGGAGAATACTAAGAAGCATATTGATGAGTATGCTGATGCTGGTCTGAGGACATTGTTACTTGCATATCGCACGCTTGATGAGGAAGAATATAATCAATTTAACAAAGAATTCACAGAGGCCAAGAACTTGGTTAGTGCAGATCGGGAGCAGATTATAGAGGAAGTAGCAGAGAAGATTGAGAAGGATTTCATTCTTCTTGGTGCTACTGCAGTTGAAGACAAACTTCAAAATGGGGTTCCTGAATGCATCGATAAATTAGCACAAGCTGGAATTAAGCTATGGGTTTTGACCGGTGATAAGATGGAGACAGCAATCAATATTGGATTTGCTTGCAGTTTACTAAGACAAGGAATGAAGCAAATTATAATTAGCTCAGACACTCCAGAAATCAAATCACTGGAGAAAATGGAGGACAAGTCTGCTTCTGCAATGGCAATTAAGGCAAGTGTTGTTCGTCAGATAAAGGATGGAAAGGCATTGCTCTCTAAGTCAGATGACAACTCTCAGGCATTAGCTCTAATCATCGATGGGAAGTCTCTTGCGTACGCACTCCAGCATGATGTGAAGGACTTGTTTCTCGAACTTGCAGTTGGCTGTGCATCTGTTATATGCTGCCGTTCATCTCCCAAACAGAAAGCACTTGTAACAAGACTGGTAAAGACTAAAACTGGTAGTGCAACTCTTGCAATTGGTGATGGGGCAAACGATGTTGGAATGCTCCAGGAGGCAGACATTGGAATTGGCATCAGTGGTGTTGAAGGAATGCAGGCAGTTATGTCAAGTGACATCGCTATTGCCCAATTTCGGTTTCTCGAGCGCCTACTTCTCGTGCATGGACATTGGTGTTACAGAAGGATATCAAAAATGATTTGCTACTTCTTTTACAAGAATATTGCCTTCGGTTTCACTCTCTTGTTCTTTGAGGTGTATGCATCATTCTCAGGGCAAGCAGCCTATAACGATTGGTTCTTGCCGCTATACAACGTATTCTTCACTTCACTTCCCGTGATTGCCTTGGGAGTGTTTGACCAGGATGTCTCTGCTAGATTATGTCTCAAGTTTCCACTACTATATCAAGAAGGTGTCCAAAATGCCCTATTTAGCTGGAAACGAATTCTTGGTTGGATTTTTAATGGGCTGTTGAGTTCTGTCATCATCTTCTTCTTCTGTGTGAAAGCGATGGAGCTGCAAGCCTTCCGAAAGGGCGGTGAAATTGTGGGTCTGGAGATCCTGGGAGGCACCATGTACACATGTGTGGTTTGGGTGGTGAACAGTCAAATGTCATTATCTATAAGCTACTTCACATACATACAGCATATATTCATATGGGGGGGCATTCTGTTTTGGTACATATTCCTGTTGGCATATGGGGCCATTGATCCCAGCATTTCAACCACCGCTTACATGGTCTTCATTGAAGCTCTGGCTCCCTCCCCGTCTTACTGGTTCATCACTTTGCTTGTGCTCTTTTCCTGCCTCGTTCCATACTTGGCCTATTCTTCCATCCAGATGAGGTTTTTCCCAATGTACCATCAAATGATACAGTGGATAAGAAATGACGGCCTAAGCAGGGATCCAGAATACTGTGATATGGTGAGACAGAGATCCATACGACACACCACCGTTGGGTACACTGCCCGTTTTGAAGCATCCAAACGATTTGAAGACAAGCCTTCAGCAGCAGCAGCAGAATTATAA 3573 0.4184 MAGHRRKRHHFRRIHAFTCGKASFRGEHSLIGGPGFSRIVLCNEPERGEDYGDNYVRTTKYTLVSFLPKSLFEQFRRVANLYFLVCAILSFFPVSPYSAVSNVVPLVVVVAVSMGKEMVEDWKRKQQDIEMNNRKVKVHRRVGPFDHSKWRDIKVGDIVKVEKDDFFPADLVLLSSSYDDSACYVETMNLDGETNLKLKQALEETSKLQEDSSFQNFKAIIKCEDPNANLYSFLGTLQLEDQQYPLAPQQLLLRDSKLRNTDFIYGVVVFTGHDTKVMQNSTDPPSKRSKVEKRMDKIIYFLFFVLFIISLIGSIFFGISTTQDLENGRIKRWYLRPDNTTVYYDPNQAAVAAILHFLTALMLYGYLIPISLYVSIEIVKVLQSIFINQDANMYYEETDRPAHARTSNLNEELGQVCTILSDKTGTLTCNSMEFIKCSIAGVSYGRGVTEVERALARRKGSPLFQNSTDEDDHVAGKPSIKGFNFVDERIMNGNWFNETRENEIRDFLRLLAVCHTAVPEVDEETGNISYEAESPDEAAFVIAARELGFEFYERTQTAILIREFNPKSKMKEERSYKLLNIIEFSSARKRMSVIVRDEEGKLLLLSKGADSVMFERLGKNGRMFEENTKKHIDEYADAGLRTLLLAYRTLDEEEYNQFNKEFTEAKNLVSADREQIIEEVAEKIEKDFILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMKQIIISSDTPEIKSLEKMEDKSASAMAIKASVVRQIKDGKALLSKSDDNSQALALIIDGKSLAYALQHDVKDLFLELAVGCASVICCRSSPKQKALVTRLVKTKTGSATLAIGDGANDVGMLQEADIGIGISGVEGMQAVMSSDIAIAQFRFLERLLLVHGHWCYRRISKMICYFFYKNIAFGFTLLFFEVYASFSGQAAYNDWFLPLYNVFFTSLPVIALGVFDQDVSARLCLKFPLLYQEGVQNALFSWKRILGWIFNGLLSSVIIFFFCVKAMELQAFRKGGEIVGLEILGGTMYTCVVWVVNSQMSLSISYFTYIQHIFIWGGILFWYIFLLAYGAIDPSISTTAYMVFIEALAPSPSYWFITLLVLFSCLVPYLAYSSIQMRFFPMYHQMIQWIRNDGLSRDPEYCDMVRQRSIRHTTVGYTARFEASKRFEDKPSAAAAEL 1190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g0011 1190 Pfam Phospholipid-translocating ATPase N-terminal 42 101 IPR032631 -
Lele23g0011 1190 SUPERFAMILY Calcium ATPase, transmembrane domain M 46 1133 IPR023298 -
Lele23g0011 1190 Pfam Phospholipid-translocating P-type ATPase C-terminal 883 1133 IPR032630 -
Lele23g0011 1190 SUPERFAMILY Calcium ATPase, transduction domain A 142 280 IPR008250 -
Lele23g0011 1190 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 51 1140 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Lele23g0011 1190 CDD P-type_ATPase_APLT_Dnf-like 53 1015 - -
Lele23g0011 1190 Gene3D - 531 666 IPR023299 GO:0000166
Lele23g0011 1190 FunFam Phospholipid-transporting ATPase 533 691 - -
Lele23g0011 1190 ProSitePatterns E1-E2 ATPases phosphorylation site. 422 428 IPR018303 -
Lele23g0011 1190 Gene3D - 687 895 IPR023214 -
Lele23g0011 1190 SUPERFAMILY HAD-like 418 910 IPR036412 -
Lele23g0011 1190 Gene3D - 109 282 - -
Lele23g0011 1190 SFLD C1.7: P-type atpase like 402 906 - -
Lele23g0011 1190 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 39 1144 - -
Lele23g0011 1190 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 490 659 IPR023299 GO:0000166
Lele23g0011 1190 Pfam E1-E2 ATPase 131 325 - -
Lele23g0011 1190 Pfam Cation transport ATPase (P-type) 514 618 - -
Lele23g0011 1190 PRINTS P-type cation-transporting ATPase superfamily signature 855 874 - -
Lele23g0011 1190 PRINTS P-type cation-transporting ATPase superfamily signature 420 434 - -
Lele23g0011 1190 PRINTS P-type cation-transporting ATPase superfamily signature 741 751 - -
Lele23g0011 1190 FunFam Phospholipid-transporting ATPase 112 282 - -
Lele23g0011 1190 FunFam Phospholipid-transporting ATPase 691 895 - -
Lele23g0011 1190 SFLD p-type atpase 402 906 IPR044492 -
Lele23g0011 1190 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 822 938 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g0011 Lele-ChrLele23 67566 72831 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g0011 10 1178 Primary Pumps ATPases AT1G68710 68.823 0.0 1745