Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g0010 ATGATCTTCCTGCATCTTAGTTTTTTGATCGGTTTTGTCGTCGTCTATTTGCGCGTTCGGCAGTTTCAGGTTCTTCATCCTCATCGGCTCGACCCCTTAAGTGAAACGATGGACCCGATGGACATCATTGGGAAATCGAAGGAAGATGCTTCGCTTCCCAAAGAAATGTTACCTCCTGATGTACGTGTTGCAAGAGATGCTCAAGATCTGTTGATTGAGTGTTGTGTAGAGTTTATAAATCTTGTGTCATCAGAATCCAATGAAGTCTGCAGCAGAGAGGAGAAAAGGACAATTGCACCTGAGCATGTATTGAAGGCTTTAGAGAGTTCATTACGTGTTCTTTCACTTCTAGCTTTCTTTTGTTATTCTGATGCATTAATGTCGTATTGCCAACAGAAAGTTTCATTTTGGGTGGACTTGTGGTATGTTGGACTACAAGAGGTGTCTCTGGATGATAGTAACGAGGTTCTTGGATTTGGTGAGTATATTGAGGAAGTTTATGCAGCATATGAACAGCACAAGATCGAGACCATGCAGGACTCTCTAAAAGGAGGGAAATGGAGCAATGTAGCAGAAATGACGGAGGAGGAAGCTTTAGCAGAGCAGCAAAGGATGTTTGCGGAGGCACGTGCCAGAATGAATGGTGAGGCCATTGCTTCCAAGCAGCCAGACGCTGACCAGAGTTTACAGAGCTGA 696 0.4411 MIFLHLSFLIGFVVVYLRVRQFQVLHPHRLDPLSETMDPMDIIGKSKEDASLPKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNEVCSREEKRTIAPEHVLKALESSLRVLSLLAFFCYSDALMSYCQQKVSFWVDLWYVGLQEVSLDDSNEVLGFGEYIEEVYAAYEQHKIETMQDSLKGGKWSNVAEMTEEEALAEQQRMFAEARARMNGEAIASKQPDADQSLQS 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g0010 231 Coils Coil 190 210 - -
Lele23g0010 231 Gene3D Histone, subunit A 45 221 IPR009072 GO:0046982
Lele23g0010 231 PANTHER PROTEIN DR1 HOMOLOG 37 109 IPR044255 -
Lele23g0010 231 SUPERFAMILY Histone-fold 52 109 IPR009072 GO:0046982
Lele23g0010 231 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 54 107 IPR003958 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g0010 Lele-ChrLele23 61781 64955 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g0010 37 230 CCAAT-DR1 Transcription Factor Family AT5G23090 58.416 2.08e-72 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Lele23g0010 CBFD_NFYB_HMF 1.6e-15 CL0012
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele23g0010 23 61781 64955 Lele23g0010 23 61781 64955 ECH
Lele21g2002 21 26907420 26910522 Lele23g0010 23 61781 64955 hybridization
Lele22g1968 22 24282712 24285443 Lele23g0010 23 61781 64955 hybridization