Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g1967 ATGGCGGGTCGCAGAAGAAAGAGGCACCACTTCAGTAGAATCCATGCGTTTACGTGTGGGAAACTTCGTTTAGAGGGAGCATTCGCTCATTGGAGGCCCTGGATTTTCCAGGATAGTGCTATGCAACGAAACAGAACGCCTGTCAGCAATGTTGTTCCTCTGGTGGTTGTAGTTGCTGTAAGTATGGGCAAAGAAATGGTTGAAGACTGGAAACGCAAACAGAAGCAGCTTCTTCTTAGGGACTCAAAGCTGAGGAATACCGATTTTATCTATGATGTGGTAATCTTTACAGATCATGACACAAAGGTTATGCAGAATTCAACAGCCCCTCCTTCAAAGAGAAGCAAAGTTGAGAAACGAAAGGATAAGATAATCTACTTCCTGTTCTTTGTCTTATTCATTATTTCTCTTGTTGGATGCATTTTCTTTGGAATTTCAACAAGGCGAGACCTTGAAAATGGAAGAACAAAAAGATGGTACCTTAGACCAGACAATACTACGGTCTACTATGATCCAAATCAAGCAGCAGTCGCGGCAATTTTACATTTCTTGACCGCACTCATGTTACATGGTTACTTGATCCCCATTTCCTTGTATGTTTCGATAGAAATCGTGAAAGTTCTTAAGAGCATATTCATTAACCAAGATGCGAGCATGTATTATGAAGAAACTGACCAGCCAGCTCATGCTCGGACGTTGAATTTGAATGAAGAACTTGGCCAAGTTCGTACCATACTTTCAGATAAAACAGGAACTTTAACCTGTAATTCTATGGAATTTATCAAGTGTTCCATTGCTGGGGTTTCTTACGGCCGTGGAGTTACAGAAGTTGAGAGAGCTCTAGCTAGAAGAAAAGGATCTCCTTTAGTTCAAAATTCGACAGATGAGGATGATCAAGTTGCAGGAAAGCCATCCATCAAAGGATTTAACTTTGTAGATGAAAGGATTATGAACGGAACTTGGTTCAATAAGACTCCTGCAAATGAAATCCGGGACTTTCTGCGTTTGCTGGCCGTATGCCATACTGCAGTGCCTGAAATCCTACAAACTCTGAACATAATAGAATTTAGCAGTGCAAGAAAGCGGATGTCTGTTATTGTTAGAGATGAGGAGGGAAAACTATTACTACCCTCCAAAGGTGCTGATAGTGTCATGTTTGAAAGACTTGGAAAGAATGGAAGTATGTTTGAGGAGAAGACTAAGAAGCATATTGATGAGTATGCAGATGCTGGTCTAAGGACATTGTTACTTGCATATCGCACGCTTGATGAGGAAGAATACAATCAATTTAACAAAGAATTCACGGAGGCCAAGAACTTGGTTAGTGCAGATCGGGAGCAGATTATAGAGGAAGTATCAGCAAAGATTGAGAAGGATTTTATTCTTCTTGGTGCTACTGCAGTTGAGGACAAATTTCAAAATGGGACTGTTCATAGTACCATATGTATCACAGCTATGTAA 1461 0.4066 MAGRRRKRHHFSRIHAFTCGKLRLEGAFAHWRPWIFQDSAMQRNRTPVSNVVPLVVVVAVSMGKEMVEDWKRKQKQLLLRDSKLRNTDFIYDVVIFTDHDTKVMQNSTAPPSKRSKVEKRKDKIIYFLFFVLFIISLVGCIFFGISTRRDLENGRTKRWYLRPDNTTVYYDPNQAAVAAILHFLTALMLHGYLIPISLYVSIEIVKVLKSIFINQDASMYYEETDQPAHARTLNLNEELGQVRTILSDKTGTLTCNSMEFIKCSIAGVSYGRGVTEVERALARRKGSPLVQNSTDEDDQVAGKPSIKGFNFVDERIMNGTWFNKTPANEIRDFLRLLAVCHTAVPEILQTLNIIEFSSARKRMSVIVRDEEGKLLLPSKGADSVMFERLGKNGSMFEEKTKKHIDEYADAGLRTLLLAYRTLDEEEYNQFNKEFTEAKNLVSADREQIIEEVSAKIEKDFILLGATAVEDKFQNGTVHSTICITAM 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g1967 486 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 74 346 - -
Lele22g1967 486 Gene3D - 243 255 IPR023214 -
Lele22g1967 486 ProSitePatterns E1-E2 ATPases phosphorylation site. 248 254 IPR018303 -
Lele22g1967 486 Gene3D - 345 470 IPR023299 GO:0000166
Lele22g1967 486 Gene3D - 256 271 IPR023299 GO:0000166
Lele22g1967 486 SUPERFAMILY Calcium ATPase, transmembrane domain M 46 240 IPR023298 -
Lele22g1967 486 Pfam Cation transport ATPase (P-type) 348 390 - -
Lele22g1967 486 Gene3D - 231 242 - -
Lele22g1967 486 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 252 471 IPR023299 GO:0000166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g1967 Lele-ChrLele22 24276755 24279361 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g1967 75 475 Primary Pumps ATPases AT1G68710 57.576 7.94e-178 530