Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g1965 ATGGCTATGGCGATGGCAAAGCTGAGCTTGGACACGCCCTCTGCTCGCACTCCCACTCCCACTTCGCCTCCCTCACTCCCCTCTCTCCGACGTCCCTCTCTCTCTATTTCCCTCCCCACCTCCACCACCATCTCTCTTCTGGCTCTCTTCCCTCTTCCCTCTGACGCCAAGGCTGTCTCCATCTCCAAGGACCAGATTGTCTCTTCTCTCACCCAAGTGGAGCAAACCATCGATCAAGTTCAGGAGACGGGTTCCGGTTTCTTCCAAACCACCCAGAGTCTTCTTCAAGCTCTCGCCGATGCTCTGAAACCTGCCCTTGACTCCGCCTTACCCGTTGTCCGCCAGGCCGCCCAGGTGGCTTTCGAAGTTGTTTCCCCGGCCATCTCCGAGGCTTCCAAAACGGCTCAACAGGCACTTCAAAGCTCCGGTCTTGATACTCAGCCTGTTCTCACTGCCGCCAAGACCGTAGCAGATGCCGTGCAACAAACAGGCCAGGTTTTTGAAGACGCCAAGCCAATAGCTTCAACAACCGTCGAAACTATATCTTCTGCAGATCCTACTGTAATAGCCGGAACAGCCGGAGCAATATTTCTTGCTTATCTCCTGCTACCTCCTGTCTGGTCTCTCGTCTCTTTTAACCTTCGTGGTTACAAAGGTGAGCTTACTCCTGCTCAAACCCTTGATCTTTTGTGTACTCAGAACTTCATTATGGTTGATGTTAGATCAGAGAAGGATAAGAACAAGGCCGGTATTCCTCGCCTTCCCTCTAATGCCAAAAACAAGATGATTGACATACCATTAGAAGAACTGCCGAGTAAGCTGAGAGGGCTGGTGAGAAATGCGAAGAAAGTAGAAGCTGAAATAGGAGCTCTGAAGATTTCATATCTCAAGAAAGTAAACAAAGGCACCAATATTGTGATCATGGACTCGTACACGGACTCAGCAAAAGAAGTTGCAAGAACGCTGACGAGCCTGGGGTTCAAGAAGTGCTATATTGTGGCGGATGGGTTTTCTGGGAACAAAGGGTGGTTACAGAGTAGATTAGGAACAGATTCATACAATTTATCGTTTGCAGAGGTACTGTCACCGTCGAGAGTGATCCCTGCCGCAGTGAGCCGCTTTGGGACGACCAGCGGAAAACTTCTTCCTGAATAG 1155 0.5039 MAMAMAKLSLDTPSARTPTPTSPPSLPSLRRPSLSISLPTSTTISLLALFPLPSDAKAVSISKDQIVSSLTQVEQTIDQVQETGSGFFQTTQSLLQALADALKPALDSALPVVRQAAQVAFEVVSPAISEASKTAQQALQSSGLDTQPVLTAAKTVADAVQQTGQVFEDAKPIASTTVETISSADPTVIAGTAGAIFLAYLLLPPVWSLVSFNLRGYKGELTPAQTLDLLCTQNFIMVDVRSEKDKNKAGIPRLPSNAKNKMIDIPLEELPSKLRGLVRNAKKVEAEIGALKISYLKKVNKGTNIVIMDSYTDSAKEVARTLTSLGFKKCYIVADGFSGNKGWLQSRLGTDSYNLSFAEVLSPSRVIPAAVSRFGTTSGKLLPE 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g1965 384 CDD RHOD 225 339 - -
Lele22g1965 384 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 221 343 IPR036873 -
Lele22g1965 384 ProSiteProfiles Rhodanese domain profile. 231 352 IPR001763 -
Lele22g1965 384 MobiDBLite consensus disorder prediction 7 32 - -
Lele22g1965 384 Gene3D - 218 357 IPR036873 -
Lele22g1965 384 PANTHER RHODANESE/CELL CYCLE CONTROL PHOSPHATASE SUPERFAMILY PROTEIN 40 350 IPR044690 GO:0009704|GO:0071277|GO:0090333
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g1965 Lele-ChrLele22 24260026 24261876 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g1965 3 310 Sulfurtransferasese or Rhodanese AT5G23060 66.346 3.24e-143 407
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele22g1965 22 24260026 24261876 Lele22g1965 22 24260026 24261876 ECH
Lele22g1965 22 24260026 24261876 Lele23g0015 23 86913 88700 hybridization
Lele22g1965 22 24260026 24261876 Lele24g1915 24 23823843 23825674 hybridization