Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g1955 ATGAACAGCCGGCCATCACCGGATACTGACGAGTTCCTGATGAATAAGAGGAAACACAGCACCTACAACTCCGAAGACTCGAGAACAGGAAGGAGAAGGTTCAAGAAGGAAGGAGCTCAAGGGAGCGGCAAGAAAGGATCATCAGTGTCGACCACTTTGAAGCTGTACGAGGACCCATGGAAGATAAAGAAGACGCTGACGGAGAGCGATCTGGGAATTCTGAGCAGGCTGTTGCTGGCGGCGGACTTGGTGAAGAAGCACTTTTTGCCTATGCTGGGTGGTGAACAAGAAAGAGCAGTTGAGAGTGAGAAAGGATCTCAGGTTAGGGTCTGGGACATGGACACTGAATCCATGCACCAGCTGCTGCTGAAGCGGTGGTCTTCTTCAAAAAGCTATGTTCTGATCGGCATGTGGAGTCAGGATTTTGTGAGGAGGAGGGAATTGAAGAAAGGCGATGAGATTGGCTTCTACTGGGACCCATATACCTCCCTCTTCAATTTCTGTGTTCTTAAGCGCGCTAATCTGATCTCTTAG 534 0.4963 MNSRPSPDTDEFLMNKRKHSTYNSEDSRTGRRRFKKEGAQGSGKKGSSVSTTLKLYEDPWKIKKTLTESDLGILSRLLLAADLVKKHFLPMLGGEQERAVESEKGSQVRVWDMDTESMHQLLLKRWSSSKSYVLIGMWSQDFVRRRELKKGDEIGFYWDPYTSLFNFCVLKRANLIS 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g1955 177 Gene3D - 58 174 IPR015300 -
Lele22g1955 177 CDD B3_DNA 60 171 IPR003340 GO:0003677
Lele22g1955 177 SUPERFAMILY DNA-binding pseudobarrel domain 59 169 IPR015300 -
Lele22g1955 177 MobiDBLite consensus disorder prediction 1 49 - -
Lele22g1955 177 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 30 172 - -
Lele22g1955 177 MobiDBLite consensus disorder prediction 10 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g1955 Lele-ChrLele22 24205333 24205866 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g1955 17 156 B3 DNA Binding Superfamily AT1G25560 31.915 7.57e-10 55.1