Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g1950 ATGGAGGGGAGCACAACCTTGGAGCAACAGCATCTTCACCATCCTTGTCTTTCTCAGAAACCCATTCTGACCTCAAGCTTACTCAACATGGAAAGTGGGGAAGGCCATGAAGGTTCTCATGTCTTAGGTCATGGTCAAGGTTTACACTATATTCCATTTTACTACTCTCAGTTACGCCTTCCCAACAACCCAATTCTGTTTATAGACCATAAACCCTCTCCAAACACTTCATCTAACAGCAACAACAATGAAAACATCAATAATTGTGGCGAAGGGAAGGTTGTTGCTGATGAGAGAAAGAAGAAAAGGATGTTCTCCAACAGAGAATCTGCTCGGAGGTCGAGGATGAGGAAGAAGCAGCAGATAGAAAACCTTCAGTATCAAGTGGATCATCTTCAGACCATGAACCATCAACTTTCGCAGAAGATCATTTATTTGTTGGAATGTAACCAGCAGATTCTCCAGCAGAACGGTCAACTCAAAGAGAAAATTTCTACACTTCAAATGGCCCTCTCTGACTTGTTAGTTCCTCTGCCTCGTGATGACGAAGCTAATCACATCTCCAATGCCCTCATCGCCGAGCCTTCTGCTCCACCAGTTGCTAGTTCCGAAGCATAG 618 0.4417 MEGSTTLEQQHLHHPCLSQKPILTSSLLNMESGEGHEGSHVLGHGQGLHYIPFYYSQLRLPNNPILFIDHKPSPNTSSNSNNNENINNCGEGKVVADERKKKRMFSNRESARRSRMRKKQQIENLQYQVDHLQTMNHQLSQKIIYLLECNQQILQQNGQLKEKISTLQMALSDLLVPLPRDDEANHISNALIAEPSAPPVASSEA 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g1950 205 MobiDBLite consensus disorder prediction 71 89 - -
Lele22g1950 205 PANTHER BASIC LEUCINE ZIPPER 43-RELATED 70 183 IPR044521 -
Lele22g1950 205 FunFam BZIP transcription factor 97 151 - -
Lele22g1950 205 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 97 146 IPR004827 GO:0003700|GO:0006355
Lele22g1950 205 CDD bZIP_plant_GBF1 100 148 IPR045314 GO:0003700|GO:0006355
Lele22g1950 205 Gene3D - 97 151 - -
Lele22g1950 205 MobiDBLite consensus disorder prediction 71 92 - -
Lele22g1950 205 Pfam bZIP transcription factor 99 157 IPR004827 GO:0003700|GO:0006355
Lele22g1950 205 SMART brlzneu 95 159 IPR004827 GO:0003700|GO:0006355
Lele22g1950 205 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 102 117 IPR004827 GO:0003700|GO:0006355
Lele22g1950 205 Coils Coil 108 142 - -
Lele22g1950 205 SUPERFAMILY Leucine zipper domain 99 155 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g1950 Lele-ChrLele22 24178417 24179034 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g1950 30 202 bZIP Transcription Factor Family AT5G60830 43.094 1.24e-31 112
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lele22g1950 bZIP_1 8.2e-13 CL0018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele22g1950 22 24178417 24179034 Lele23g0025 23 152636 153157 hybridization
Lele22g1950 22 24178417 24179034 Lele24g1901 24 23738985 23739602 hybridization