Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g1940 ATGGGTGAAACGTACGTACGCAGGCATTTTATGGGAGAAGATCTGGAGGGTTTAAGTCTGAAAGAGCTTCAGAATTTGGAGCATCAGCTGGAGTCAGCTCTGAAACACATAAGATCACGAACGAACCGGCTCATGAACGAATCTATTTCTGAGCTTCAGAAAAAGGATAAGGCACTGCAGGAACAAAACAACGTACTCGCTAAGAAGATAAAGGAAAGAGAGAAGGCAGTGGAGGAGCAGCAGCAGCAGCAGAAGAATCAAGGGTTGGATGATTCCTCTGTTCAGTTAACACAACACCCATTGCTGCCTGTGAATATCATCGGAATGGGCAGGAGGCGATTCAGGTTGAAGTTGAACTGCGTGAGCATTGCGCGAGTGTTGTCTGCGCCATCGTTTGAATCCAAATCCTCATCGGCTTCTCTCAAATATGGAGATATGAGTGAGTTCTCAAGCACTAGCCAGGAAGATAGCCATTGTGATGATGAGAATGGGAATAAGATCATGGTGGTCGTGAATTCTAGCTTTGAAGCTAAATGTGCTCTGGACTGGGCTCTCTCTCACGCCGTGCAGCCTCAGGACACAGTTCTTCTTCTTCACGCAGCCAAGCCCTCCTCACAAGGAACAGAGTGTGGGGAGAAGCTTGATGTGAAGACCTATCAACTTGTGGTTGATATGAAGAACATGTGCCAGATGAAGAGACCAGGGGTGCAAGTGAGGGTGGTGAAGGTGGAAGGGGAGGAACAGGGGAGAGCGATAGTGGAGGAGGCAAAGCAGCAGAGAGTGTCGCTGCTGGTGATAGGGCAGAGAAAGAGATCGCTGTGGAGAGGCCTTGTGCGAAGGTTTTGGGCCACCAAGAGAGCAGCTTCTGGCAATGTTGCTCATTACTGCATTCAGAATGCCACCTGCATGACCATTGCTGTTAGGAGGAAGAACAACAAGCTTGGAGGCTACTTGATCACTACTAAACGTCATAAAAACTTTTGGCTTTTGGCTTAA 996 0.4819 MGETYVRRHFMGEDLEGLSLKELQNLEHQLESALKHIRSRTNRLMNESISELQKKDKALQEQNNVLAKKIKEREKAVEEQQQQQKNQGLDDSSVQLTQHPLLPVNIIGMGRRRFRLKLNCVSIARVLSAPSFESKSSSASLKYGDMSEFSSTSQEDSHCDDENGNKIMVVVNSSFEAKCALDWALSHAVQPQDTVLLLHAAKPSSQGTECGEKLDVKTYQLVVDMKNMCQMKRPGVQVRVVKVEGEEQGRAIVEEAKQQRVSLLVIGQRKRSLWRGLVRRFWATKRAASGNVAHYCIQNATCMTIAVRRKNNKLGGYLITTKRHKNFWLLA 331
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lele22g1940 331 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 165 310 - -
Lele22g1940 331 Coils Coil 20 87 - -
Lele22g1940 331 Gene3D HUPs 164 315 IPR014729 -
Lele22g1940 331 CDD USP_Like 166 307 - -
Lele22g1940 331 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE SUPERFAMILY PROTEIN 109 331 - -
Lele22g1940 331 ProSiteProfiles K-box domain profile. 1 76 IPR002487 GO:0003700|GO:0005634|GO:0006355
Lele22g1940 331 Pfam Universal stress protein family 166 308 IPR006016 -
Lele22g1940 331 Pfam K-box region 7 70 IPR002487 GO:0003700|GO:0005634|GO:0006355
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lele22g1940 Lele-ChrLele22 24101945 24105965 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g1940 7 99 MADS-box Gene Family AT5G60910 64.516 1.87e-27 104