Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g1933 ATGGTAGCAAATGTGGGATTTGGCTGGATGCTTTCACTTCCAAAATTTGGTGGAAAGATAATTGATATCGTCTCAGGAGATATTCAAACTCCCGAAGATAAAGCTAAAGCTTTGGAACTTGGAAGCTCTCAAGATCACTATACTGTACATTTTTCTGATTGTTGTTGTTGGGAGATAGCCTTCTTTGATGTTACCCGTACCGGGGAACTTATGAGCAGGATATCTGAAGATACACAGATCATAAAAAATGCAGCAACTACCAATCTTTCTCATGCGCTGAGTAGCTTATCGACTGCATTTATTGGTCTTTGCTTCATGTTTTTTGACGTCATGGAAAATGATATCTCAAGTGATTATAAAAGCTTATTCAAACTGATCAATTCCATGTCCCCCGGTGATCTTACGTCTTTCATTCTTTATAGTCTCACAGTGGGACCTTCTGTATCTGGTCTCTCAGGATTGTATACCATAGCTATGAAAACTGTGGGTGCAAGCAGACGGGTGTTTCACCTTCTTGATCGTGTATCATCAATGCCAATGTCGGGAAATAAATGTCCTCTGGGAGAACAAGATGGTGATGTGGAGCTAGATGATGTCTGGTTTGCATATCCATTTCGTCCCAGTCATATAGTACTTAAGGGAATTACAATGAAATTGGATCCTGGCTCAAAGGTTGCTCTTGTTGCTTATGGATTTGATGGCAAAGTTAATCCTGCTGATATAGAAAATGCAGCTGATGCCATGGAACGTCTGATGAAGGGAAGGACAGTTCTAGTGATTGCTCACAGGCTATCAACTGTAAAGAGTGCTGATACAGTTGTAGTTGTTTCCGATGGTGAAATTGTGGAAAGTGGCACCCATGAACACCTTCTCAGCAACAATGGTGTCTATTCTGCATTAGTCAAAGCAACAATCGAGAATGCAGTTGATATGCCTGACAATGAGTGTAGAAATACTGTTGCAAACATTTCTCAATTTCTCCATACTGCTACAAACATGGCTTTGCAAAGTGCATCAGGTGACATTTCTCATTTAACCTTAGTCAGAAAGCATGATCATTCTAAGGTATCACATTTTTCACTTGGTAGAGCCATATCAAGCAACTCAGAAAAGAAGCTTCTTGTACTTGACCTTAATGGGCTACTTGCTGACTTTGTCCTTGGTGTTCCTGAGGGATATAAACCAGACAGAATGATACAAAACAAAGCAGTTTTCAAGAGGCCTTTTTGTGTTGATTTTCTGCAGTTCTGTTTGACAAATTTCATGTTGGATCAAGGACGCTGTGCTATGACAAAATTCAAGACCATCGAGGACAAACACAAGCCCATTATGTTGAAGGAATTTAGGAAGTTGTGGGAAAAGTGTAGACCTGAGCTTCCGTGGAATAAGGGAGAGTTCAACGAGACAAACACTTTGTTGTTGTATGACTCCTCTTACAAAGCAATACGGAATCCAATGCACACAGCAATATTTCCTTATTCTTACCGGTCCAACGATGCCAATGACACAGCTTTAGGACCTGGAGGGGATCTTCGTGTTTATCTTGAAGGATTGGCTATGACTGAGAATGTTCAGGAGTACGTGCCTTCTCATCCATTTGGTCAACCACCCATAACAGAATCAAGCCCACACTGGCAATTTTATTGTGAAGTTAAGAGATCGAGGGCATAA 1671 0.4075 MVANVGFGWMLSLPKFGGKIIDIVSGDIQTPEDKAKALELGSSQDHYTVHFSDCCCWEIAFFDVTRTGELMSRISEDTQIIKNAATTNLSHALSSLSTAFIGLCFMFFDVMENDISSDYKSLFKLINSMSPGDLTSFILYSLTVGPSVSGLSGLYTIAMKTVGASRRVFHLLDRVSSMPMSGNKCPLGEQDGDVELDDVWFAYPFRPSHIVLKGITMKLDPGSKVALVAYGFDGKVNPADIENAADAMERLMKGRTVLVIAHRLSTVKSADTVVVVSDGEIVESGTHEHLLSNNGVYSALVKATIENAVDMPDNECRNTVANISQFLHTATNMALQSASGDISHLTLVRKHDHSKVSHFSLGRAISSNSEKKLLVLDLNGLLADFVLGVPEGYKPDRMIQNKAVFKRPFCVDFLQFCLTNFMLDQGRCAMTKFKTIEDKHKPIMLKEFRKLWEKCRPELPWNKGEFNETNTLLLYDSSYKAIRNPMHTAIFPYSYRSNDANDTALGPGGDLRVYLEGLAMTENVQEYVPSHPFGQPPITESSPHWQFYCEVKRSRA 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g1933 556 PANTHER ATP-DEPENDENT PERMEASE MDL1, MITOCHONDRIAL 246 303 - -
Lele22g1933 556 Pfam NLI interacting factor-like phosphatase 372 524 IPR004274 -
Lele22g1933 556 Gene3D - 192 228 IPR027417 -
Lele22g1933 556 Gene3D - 333 423 IPR023214 -
Lele22g1933 556 Gene3D - 424 531 IPR023214 -
Lele22g1933 556 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 58 108 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele22g1933 556 SUPERFAMILY ABC transporter transmembrane region 58 108 IPR036640 GO:0005524|GO:0016020
Lele22g1933 556 Gene3D ABC transporter type 1, transmembrane domain 127 191 IPR036640 GO:0005524|GO:0016020
Lele22g1933 556 SUPERFAMILY HAD-like 368 526 IPR036412 -
Lele22g1933 556 SUPERFAMILY ABC transporter transmembrane region 125 173 IPR036640 GO:0005524|GO:0016020
Lele22g1933 556 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 245 302 IPR027417 -
Lele22g1933 556 Pfam ABC transporter transmembrane region 58 108 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele22g1933 556 Gene3D ABC transporter type 1, transmembrane domain 56 111 IPR036640 GO:0005524|GO:0016020
Lele22g1933 556 Gene3D - 233 317 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g1933 Lele-ChrLele22 24026953 24042621 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g1933 246 302 Calmodulin-binding Proteins AT2G36910 52.542 5.94e-12 67.0