Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g1930 ATGATGACTGGAAATTCAAGAAAAGGTTATCAAGGGAAGCAAGAGGAAAATAGTAGTAGTGCTCATCATTATCATCATCAACAACAACAACAACACATTATTAGTAACAGTATTGAGAGGTTGTACAGCAAGGTAGGGTCTTCCTCTTCCTCTTCAAGACAATGGTCTGGTCTGAGAAACCCAAGAATCGTGCGAGTGTCAAGGTCTTTTGGAGGCAAAGATAGGCACAGCAAAGTCTGCACCATTAGAGGGCTTAGAGACAGAAGGATCAGGCTTTCTGTGCCCACTGCGATTCAGCTATATGAGCTTCAAGATCGGCTTGGACTGAACCAACCCAGCAAGGTCATTGATTGGCTCATTGAAACCACAAAACAAGACATTGATAAGCTCCCACCTCTTCCAATCCCTCTTGGTTTCCCCCAATTTCATCCCCAACACAACCAAACCCTACTTAATCCTGATCACGAATCAAGTTCTTCCTCTCATCATCATCAGTTTGGAGCTTTCTTTGATGCAAATAATAATAATAGCACGGCTAGTTTCATGGATGCAGTGTCGAGGCTAAAAGGAAAAGAGTTAGATGAAAGAGGGAAGTGGGTGATGAAAACAAACAATGAAGAAGACGGAATTGGTGGTTCTGGTTCTGCTCAGAATCTTTTCCCATCTGGGAATGCTAATTCTTCTCACTCTTGTTTACCTATGACGTATTATAATAATCCCTTCCATTCTGAGCCTTCAAATTTTCTATCTTTATTCGGAAGCCATGGTGTGTTCCCTAATAATAGTAGTAATAATAATAACAATCACCAGGTAGATCCTGCAGGCCATACTAGTTTGCAGTTTCCATCTTCCTCGTCATCAGCTAGTGTTTCCCAAGTGTTGTTCTGTCCAAGTAATACATCTGCAACAACAACACCATCACTTTTTGGTACTTATTATGCTCCATATTCCTCAGTGTCACTGGAAACAGACCCAAGAATGCAACAATTGAACCATATTCAGTTGATGAGTTCATCCAATTCTCATCTTCATCATCCTCTCCTTCTTCCCTCTCTGAAACCCCTAATTCCAACACCGCCTTTTAGTTCCAGGCTTCTTGATTCAAATGATAAGGATGATAATACTCAGTCTTGA 1134 0.4109 MMTGNSRKGYQGKQEENSSSAHHYHHQQQQQHIISNSIERLYSKVGSSSSSSRQWSGLRNPRIVRVSRSFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYELQDRLGLNQPSKVIDWLIETTKQDIDKLPPLPIPLGFPQFHPQHNQTLLNPDHESSSSSHHHQFGAFFDANNNNSTASFMDAVSRLKGKELDERGKWVMKTNNEEDGIGGSGSAQNLFPSGNANSSHSCLPMTYYNNPFHSEPSNFLSLFGSHGVFPNNSSNNNNNHQVDPAGHTSLQFPSSSSSASVSQVLFCPSNTSATTTPSLFGTYYAPYSSVSLETDPRMQQLNHIQLMSSSNSHLHHPLLLPSLKPLIPTPPFSSRLLDSNDKDDNTQS 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g1930 377 MobiDBLite consensus disorder prediction 1 32 - -
Lele22g1930 377 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 21 320 IPR005333 GO:0003700
Lele22g1930 377 MobiDBLite consensus disorder prediction 260 283 - -
Lele22g1930 377 Pfam TCP family transcription factor 72 187 IPR017887 -
Lele22g1930 377 ProSiteProfiles TCP domain profile. 72 130 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g1930 Lele-ChrLele22 24000282 24001415 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g1930 56 144 TCP Transcription Factor Family AT5G60970 80.899 5.32e-47 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Lele22g1930 TCP 3.8e-26 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele22g1930 22 24000282 24001415 Lele24g1878 24 23560481 23561605 hybridization