Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g1902 ATGTCTGGTTTGAGGAAATCTCCCCTAAAATTTGTTATACATAATTCTGTTGAACCGGTCTATCCTGTTAAATCGAGATCAAATCCCTTTGATTCTGATGATGATGAGCCAAAGGAAAACCAAAAAAATAATTCCACGAATAGGACATCTTCAGATCCTTCTCTAGTTTTACAAGGAGGAAAAACCAATCCCTTTGATGATGATGGAGGCCATAGGAACTCTTCTTCATCTTATGCCATTCAATCAGCAAACCGAAACAAGTATAGGAATGATTTTCGTGATTCAGGAGGAATAGATAATCAATCAGTGCAAGAATTGGAGAATTATGCTGTTTGCAAGGCTGAAGAGACTACAAAATCAGTCAATAACTGTTTGAAGATAGCAGAGGAGATAAGAGAGGATGCCACCAAGACTTTAGTCACTCTACACCAACAGGGTGAGCAAATTACCAGGTCTCACAATGTTGCAGTTGACATCGACCAAGATCTTAGTCGGGGAGAAAGGCTTTTAGGAAGTCTTGGTGGCATCTTTTCCAAAACTTGGAAACCAAAGAAGACAAGAGCAATTACGGGCCCTGTTATTGTTGGAGATGATCAGGTCCGAAGAAAGGGAAGCCACTTGGAGCAGAGAGAGAAATTGGTATTGACTTCTGCACCCAGAGGGAAGTCAAACTCTCGAACACCACCTCCTGAGCCAACCAATGCTCTTGAAAAAGTTGAGATTGAAAAGGGGAAACAAGATGACTCATTGTCAGATTTAAACGATCTCTTGGGAGAGCTGAAAGATATGGCTATTGACATGGGATCTGAAATTGAGAGCCACAACAAAGCGCTGGGCCATATGTACAACGATGTGGAGGAGTTGAATTACCGCATGAAAGGGGCTAATCAACGTGGTGGCCGTTTAATGGGAAAATAA 918 0.4161 MSGLRKSPLKFVIHNSVEPVYPVKSRSNPFDSDDDEPKENQKNNSTNRTSSDPSLVLQGGKTNPFDDDGGHRNSSSSYAIQSANRNKYRNDFRDSGGIDNQSVQELENYAVCKAEETTKSVNNCLKIAEEIREDATKTLVTLHQQGEQITRSHNVAVDIDQDLSRGERLLGSLGGIFSKTWKPKKTRAITGPVIVGDDQVRRKGSHLEQREKLVLTSAPRGKSNSRTPPPEPTNALEKVEIEKGKQDDSLSDLNDLLGELKDMAIDMGSEIESHNKALGHMYNDVEELNYRMKGANQRGGRLMGK 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g1902 305 MobiDBLite consensus disorder prediction 1 77 - -
Lele22g1902 305 Gene3D - 97 174 - -
Lele22g1902 305 Gene3D - 238 304 - -
Lele22g1902 305 SMART tSNARE_6 106 173 IPR000727 -
Lele22g1902 305 SMART tSNARE_6 235 302 IPR000727 -
Lele22g1902 305 MobiDBLite consensus disorder prediction 201 215 - -
Lele22g1902 305 MobiDBLite consensus disorder prediction 28 42 - -
Lele22g1902 305 MobiDBLite consensus disorder prediction 201 235 - -
Lele22g1902 305 MobiDBLite consensus disorder prediction 43 58 - -
Lele22g1902 305 CDD SNARE_SNAP25N_23N_29N_SEC9N 108 172 IPR044766 GO:0005484|GO:0031201
Lele22g1902 305 FunFam SNAP25 homologous protein SNAP33 97 174 - -
Lele22g1902 305 SUPERFAMILY SNARE fusion complex 243 302 - -
Lele22g1902 305 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 240 302 IPR000727 -
Lele22g1902 305 PANTHER SYNAPTOSOMAL ASSOCIATED PROTEIN 27 305 - -
Lele22g1902 305 CDD SNARE_Qc 245 301 - -
Lele22g1902 305 SUPERFAMILY SNARE fusion complex 101 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g1902 Lele-ChrLele22 23795395 23797796 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele22g1902 22 23795395 23797796 Lele22g1902 22 23795395 23797796 ECH
Lele22g1902 22 23795395 23797796 Lele23g0076 23 505436 507336 hybridization
Lele22g1902 22 23795395 23797796 Lele24g1852 24 23388017 23393191 hybridization