Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lele22g1894 | ATGGCGCTGTTCAGAAGGTTCTTTTACAGGAAGCCGCCGGATCGGCTTCTGGAGATCTCCGAGAGAGTTTATGTTTTTGATTGTTGCTTCTCCACAGATGTGTTGGAAGAAGATGAATACAAAGTTTATATGGGGGGGATTGTAGCTCAGCTACAGGACCACTTTCCTGATGCTTCTTTCATGGTGTTTAACTTCAGGGAAGGGGAGAAGCGTAGTCAAATTTCAGATATATTGTCTCAATATGACATGACAGTTATGGAATACCCTCGTCAATATGAGGGTTGTCCTCTTCTGCCTTTGGAAATGATCCATCACTTCCTTCGATCAAGTGAAAGCTGGTTGTCTTTGGAGGGGCAACAAAATGTTCTTTTGATGCATTGTGAAAGAGGAGGTTGGCCTGTGCTTGCGTTTATGCTAGCAGGTCTTCTGTTGTACCGGAAACAGTACAATGGGGAGCAAAAAACCCTTGAAATGGTCTACAAGCAAGCTCCTAAAGAACTTCTCCACCTTCTATCTCCTTTGAACCCACAACCTTCTCATTTGAGATATCTTCAATACATTTCCAGGAGAAATATGGGTTCTGAGTGGCCTCCATCAGACGCACCCTTATATTTGGATTGTCTGATTCTTAGAGTCCTTCCGTTATTTGATGGTGGAAAAGGTTGTAGGCCTGTTGTACGTGTTTATGGTCAGGACCCTTCAAAACTTGTTAATAGAAGTTCTAAGCTTCTTTTTTCTACTTCAAAAAACAAAAAACATGTTCGCCTCTACCAACAGGCAGAGTGTATGCTGGTGAAAATTGATATCCAATGTCGTGTTCAAGGGGATGTGGTTCTTGAGTGCATACATACGGATGATGACTTAAGTCGTGAGGAGATGATGTTTAGAGTTATGTTTCAAACAGCATTTGTGCGTTCAAACATATTGGTGCTCAACCGTGATGAGGTTGATGTTTTGTGGGATTCTAAGGATCAATTTCCTAGGGATTTTAAAGCAGAGGTACTTTTTTTGGACGCTGATGCTGTTATGCCTAATCTAACCACAGTCAGGGCAAGTGAAGATGCAAATGAGACAGGAACTGCATCACCTGAGGAATTTTATGAGGTGGAAGAGATATTTAGCAATGTAGTTGATGTGCAGGAAGGTAAGGTAGATTATGATTCTCTTCTGGCTCAAGACAGTGTAATAGATGATCAAAACCGAAAAGAAGTATGGAAAGAGAACTTCGGTCCTCCCACTTTTCAGGAATGTACATCAGATGATCGGACCTACAAGCAGGACAGAAGGGTGGATTCTGGTACTAATGCGGTTAAAGACATTTCTGTTGATGATGTGAAGTACAAGCTTGATGAGAGTGTCGATTCTAATAATCATGAAGTGAAAGATATTGCTGTGGATGATGGAGAAATTAAGAATACTTCTACAGTAGTCACTACTGATTTCATTATGGAAATGAAGGATGTCAATGAAGACATGCCTGGGCAATTGGAAGATACGGACAACAAATATGATGAATTTGGCAATGCAATAGAGAAGAAATTAGATTCCAAGGAAGGCCAGCAGAAACATGATTTTTCCAGACAAAAATCTGATAAAGTACCACCTGTGGCAAAAAAACAACTTTCGTCAAACTTGAAGCCAGTGGGAGATACATTTACAGCTAAGCAAAAGATTAAGCAGCTTGAATCACAAGGTAGTCAAGCAAAACAAGCAAAGCCAAATGCAGTACCTAGGTGGATTCCTCCTAACAAAGGTTCTTACACAAATTCAATGCATGTTTACTATCCACCATCAAGGTATAATAGCGCACCTGCCGCACTTTCCAACATTAACTCTTCAAAGGAGAAAACTATAGATGCCAAATCAAGTGACAAGGCAAATGGATTGAAATGTCAAAAGGTGGACGTACCAAAATTTGCAGACTCCATAGCAGAAATGGAAGAAGAAAACTTACTATCAATTAATGAGACATGTCTTCAAACACCAAGTCAAGCACCACTTAGTAGCTCGACACAAGTGTTGCAACCTCCTCCTCCTCCTCCTCCCCCACCCCCGCCCCCGCCCCCACCCCCACCTTCATTTCATGGTAAAAACTCTATGGCATATGCTTTTGAAACATCATCTGAGTTTTTGGAATGTCTAGTGTAA | 2148 | 0.412 | MALFRRFFYRKPPDRLLEISERVYVFDCCFSTDVLEEDEYKVYMGGIVAQLQDHFPDASFMVFNFREGEKRSQISDILSQYDMTVMEYPRQYEGCPLLPLEMIHHFLRSSESWLSLEGQQNVLLMHCERGGWPVLAFMLAGLLLYRKQYNGEQKTLEMVYKQAPKELLHLLSPLNPQPSHLRYLQYISRRNMGSEWPPSDAPLYLDCLILRVLPLFDGGKGCRPVVRVYGQDPSKLVNRSSKLLFSTSKNKKHVRLYQQAECMLVKIDIQCRVQGDVVLECIHTDDDLSREEMMFRVMFQTAFVRSNILVLNRDEVDVLWDSKDQFPRDFKAEVLFLDADAVMPNLTTVRASEDANETGTASPEEFYEVEEIFSNVVDVQEGKVDYDSLLAQDSVIDDQNRKEVWKENFGPPTFQECTSDDRTYKQDRRVDSGTNAVKDISVDDVKYKLDESVDSNNHEVKDIAVDDGEIKNTSTVVTTDFIMEMKDVNEDMPGQLEDTDNKYDEFGNAIEKKLDSKEGQQKHDFSRQKSDKVPPVAKKQLSSNLKPVGDTFTAKQKIKQLESQGSQAKQAKPNAVPRWIPPNKGSYTNSMHVYYPPSRYNSAPAALSNINSSKEKTIDAKSSDKANGLKCQKVDVPKFADSIAEMEEENLLSINETCLQTPSQAPLSSSTQVLQPPPPPPPPPPPPPPPPPSFHGKNSMAYAFETSSEFLECLV | 715 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lele22g1894 | 715 | PANTHER | FORMIN-J | 1 | 692 | - | - | |
| Lele22g1894 | 715 | SUPERFAMILY | (Phosphotyrosine protein) phosphatases II | 13 | 188 | IPR029021 | - | |
| Lele22g1894 | 715 | MobiDBLite | consensus disorder prediction | 562 | 583 | - | - | |
| Lele22g1894 | 715 | MobiDBLite | consensus disorder prediction | 672 | 695 | - | - | |
| Lele22g1894 | 715 | Gene3D | - | 204 | 336 | - | - | |
| Lele22g1894 | 715 | MobiDBLite | consensus disorder prediction | 514 | 541 | - | - | |
| Lele22g1894 | 715 | Pfam | C2 domain of PTEN tumour-suppressor protein | 200 | 336 | IPR014020 | - | |
| Lele22g1894 | 715 | MobiDBLite | consensus disorder prediction | 659 | 698 | - | - | |
| Lele22g1894 | 715 | Gene3D | Protein tyrosine phosphatase superfamily | 14 | 203 | IPR029021 | - | |
| Lele22g1894 | 715 | ProSiteProfiles | C2 tensin-type domain profile. | 200 | 339 | IPR014020 | - | |
| Lele22g1894 | 715 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 201 | 336 | IPR035892 | - | |
| Lele22g1894 | 715 | MobiDBLite | consensus disorder prediction | 514 | 534 | - | - | |
| Lele22g1894 | 715 | SMART | PTEN_C2_2 | 198 | 338 | IPR014020 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lele22g1894 | Lele-ChrLele22 | 23729037 | 23732493 | Dispersed/Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Lele22g1894 | 1 | 694 | FH2 protein (formin) Gene Family | AT5G07740 | 61.373 | 0.0 | 820 |