Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g1892 ATGACTTGTTTCATGTTCTATCTTAGTGCCCCAGAATTTGACTTTTCAGAGCTAGAGAGCCTTTTCTCTGCAAATGTTCCTAAACCTGCTGGTTCAGGTGGTAAATCTGGAGATCGGCGTAAATCTGCTGGGTCCAAACCTGACAAAGTTCACTTGGTATCCTTCTATGCTAATGTTCTTGAAATATGGTATTTTGAAATAAAGCATGGTGTGAAGGGTGTACTAGCTATGGACGAGTCGGTATTAGATGTTGATCAGGTTGAAAATCTCATCAAATTTTGTCCTACTAAAGAGGAAATGGAACTTTTGAAGGGATATGCTGGGGACAAGGAGAATTTGGGAAAGTGTGAGCAGATTACTGAATTCAAGAAGAGTTTAAACACTGTGAACTCTGCCTATGAAGAGGTCCGAAAATCTGTCAAACTGAAGGAGATAATGAAGAAAATTCTTTACTTGGGGAATACCCTGAATCAAGGAACAGCGAGGGGATCTGCAGTTGGATTCAAGTTGGATAGTCTATTAAAGCTCACAGACACTCGTGCTTCTAACAATAAGATGACACTCATGCATTACCTTTGCAAGGTCCTTGCTGAAAGAGCACCTGGACTCCTTGATTTTCACCTAGACCTAGTCAGCCTGGAAGCTGCCACTAAGATACAATTGAAGTCATTAGCTGAAGAGATGCAGGCAATCATCAAGGGATTAGAAAAGGTCAAGCAGGAGCTTGCTGCATCTGAAAATGATGGACCTGTATCTGAAGTTTTCCGCAAGACATCAAAAGAATTTGTTGTTGGTGCTGAGTCAGAGGTGGCATCTGTAACAACTTTATATTCTGTGGTGGGTAGAAATGCAGATGCACTCGCGCTTTATTTTGGTGAGGATCCTGCCCGTTGCCCATTTGAGCAAGTTACTGCAACTCTCCTAAATTTTATAAGGTTGTTTCGGAAAGCACATGAAGAAAATTGTAAGCAAGCAGAGTTAGAGAAGAAGAAAGCTGAGAAAGAGGCTGAAATGGAGAAGGCTAAGGGCGTTAACTTGACAAAGAAAAGTGCAAGATAG 1059 0.4145 MTCFMFYLSAPEFDFSELESLFSANVPKPAGSGGKSGDRRKSAGSKPDKVHLVSFYANVLEIWYFEIKHGVKGVLAMDESVLDVDQVENLIKFCPTKEEMELLKGYAGDKENLGKCEQITEFKKSLNTVNSAYEEVRKSVKLKEIMKKILYLGNTLNQGTARGSAVGFKLDSLLKLTDTRASNNKMTLMHYLCKVLAERAPGLLDFHLDLVSLEAATKIQLKSLAEEMQAIIKGLEKVKQELAASENDGPVSEVFRKTSKEFVVGAESEVASVTTLYSVVGRNADALALYFGEDPARCPFEQVTATLLNFIRLFRKAHEENCKQAELEKKKAEKEAEMEKAKGVNLTKKSAR 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g1892 352 SMART it6_source 2 352 IPR015425 -
Lele22g1892 352 Coils Coil 315 349 - -
Lele22g1892 352 MobiDBLite consensus disorder prediction 330 352 - -
Lele22g1892 352 Pfam Formin Homology 2 Domain 12 118 IPR015425 -
Lele22g1892 352 Pfam Formin Homology 2 Domain 117 314 IPR015425 -
Lele22g1892 352 Gene3D Formin, FH2 domain 8 118 IPR042201 -
Lele22g1892 352 MobiDBLite consensus disorder prediction 330 346 - -
Lele22g1892 352 Gene3D Formin, FH2 domain 119 348 IPR042201 -
Lele22g1892 352 ProSiteProfiles Formin homology-2 (FH2) domain profile. 1 340 IPR015425 -
Lele22g1892 352 Coils Coil 221 248 - -
Lele22g1892 352 PANTHER FORMIN-J 9 347 - -
Lele22g1892 352 SUPERFAMILY Formin homology 2 domain (FH2 domain) 72 342 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g1892 Lele-ChrLele22 23723716 23727771 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g1892 12 349 FH2 protein (formin) Gene Family AT5G07740 71.622 5.94e-164 496
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele22g1892 22 23723716 23727771 Lele23g0089 23 585740 595111 hybridization
Lele22g1892 22 23723716 23727771 Lele24g1840 24 23322914 23331700 hybridization