Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g1878 ATGGAAAACATTGCTCTTGTGTATAGCACCAAGGATGAAGATCGGATGAATTTGCCTCCTGGATTTCGGTTTCACCCAACAGATGAAGAGCTTATCACTCATTATCTGTTCAACAAGGTCACTCTTACAAACTTCTCTGCCATAGCCATTGGAGAAGTGGATTTGAACAGGTCTGAGCCTTGGGATTTGCCACGGAAAGCAAAACTGGGAGAGGAAGAGTGGTATTTTTTCTGCGTGAGAGACAGAAAATACCCAACTGGTTTGAGAACCAACAGAGCCACTGAAGCAGGGTACTGGAAGGCCACAGGAAAAGATAGAGAGATTTACAGAGGAAAATCTCTGGTGGGGATGAAGAAAACTCTGGTCTTTTACAGAGGAAGAGCACCAAAAGGAGAAAAAACCAACTGGGTCATGCATGAATACAGATTAGATGGTAAATTCTCTGTCCACAACCTCCCCAAAACTGCAAAGAACGAGTGGGTTATTTGCAGGGTGTTTCGGAAGAATTCTGGTGGCAACAAAACCCATATGTCAGCTATAATGAGGTTTGAATCCACTGGAAACGGATTGGGTGGTTCTTCAGTTTTACCACCTCTCGCGGATTATTCTCCTGAATCTGCATACGTGTCCTGCTTCTCCATTGCAATCGATGATCAAAGAAACCATAGAGGGATCTTTGATTCCTTAGGAAACTCGAACTCCCTTTGGCGGATTCCTTCAAGTTCTCCTCCAGAAATTCTGCCAAGAATCCCTCTTTCTGGATCATTTCAAGCTCCTGCAAATTTGCCAATATCTTCAGGTCTTGCTTTCTCCTGGCAGGACCACCAGAACCTGCTTAAGGCTTTTCTTCAAAACCATGGATCTATCTCCAGGGCAGAACAAATTGTGAGTGTTTCGCAAGAAACTGATATGAATCCTGAGATTTCTTCTGTGATCTCAAGTTTTGATGATTCTGCTGCTGCACCAGTAGTGGAGCGCGATAGCTTGTGGAATTACTGA 999 0.4394 MENIALVYSTKDEDRMNLPPGFRFHPTDEELITHYLFNKVTLTNFSAIAIGEVDLNRSEPWDLPRKAKLGEEEWYFFCVRDRKYPTGLRTNRATEAGYWKATGKDREIYRGKSLVGMKKTLVFYRGRAPKGEKTNWVMHEYRLDGKFSVHNLPKTAKNEWVICRVFRKNSGGNKTHMSAIMRFESTGNGLGGSSVLPPLADYSPESAYVSCFSIAIDDQRNHRGIFDSLGNSNSLWRIPSSSPPEILPRIPLSGSFQAPANLPISSGLAFSWQDHQNLLKAFLQNHGSISRAEQIVSVSQETDMNPEISSVISSFDDSAAAPVVERDSLWNY 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g1878 332 FunFam NAC domain-containing protein 100-like 27 172 - -
Lele22g1878 332 Gene3D NAC domain 27 172 IPR036093 GO:0003677|GO:0006355
Lele22g1878 332 SUPERFAMILY NAC domain 14 168 IPR036093 GO:0003677|GO:0006355
Lele22g1878 332 ProSiteProfiles NAC domain profile. 18 168 IPR003441 GO:0003677|GO:0006355
Lele22g1878 332 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 17 231 - -
Lele22g1878 332 Pfam No apical meristem (NAM) protein 19 143 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g1878 Lele-ChrLele22 23647693 23648863 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g1878 16 332 NAC Transcription Factor Family AT5G07680 57.057 8.12e-118 341
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele22g1878 NAM 2.1e-39 No_clan