Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g1877 ATGGAGAACATTTCTGTACTGTCCAACAAGGAACAAGGTCGTCAGCTGAATTTGCCTCCTGGCTTTCGGTTTCACCCAACAGATGAAGAGTTACTCACTTACTATCTGTACAAGAAGGTCACTCAACCCAAATTCTCTGCTATCGCCATTGGAGAAGTGGATATATACAAGTCTGAACCTTGGGATTTGCCATGGAAAGCGAAAATGGGAGAAGATGAATGAACGAGTGGATCATTTGCAGGGTTTTCCGGGTCTTCAGGTTCAGTGTCACTTTCACCACCTGCAATAAATACTGATTGGGTCCATGTGTCCTGCTTCTCCTCCCCGTGCTATGACCAAACCGAGCAAGCAGGGAATCTTCATTCTACAGGAAACTCCCTTTCAGGGATTTTTTCGAATCCTCAAGAATCTGTGCCAAGAATCCCTCTTCAAGCTCCTATGAATCTGCCACTGTCAGATTCTGCTTTTACTGTGCAGGAACAGAACTTCCTTGATTCTGTTTTTGAGAATCGTGGATGGAGCTTGAGAAATGGCTTTATGTCAGCGATGACGGAGCAAATGGACGGTGTTTCGCCGGAAACGGGTCACACCGCCACTCACATGGATCCGGAGATATCTTCTTTCATATCAAGTTTTGGTAATCAGCAAAACCCATCTGCTTCTTATGCAGCACCTGCACCAGTGGACCTTGATAATTTGAACAACTTCTGTAGTTATTACTCTTACTAG 729 0.4486 MENISVLSNKEQGRQLNLPPGFRFHPTDEELLTYYLYKKVTQPKFSAIAIGEVDIYKSEPWDLPWKAKMGEDEXTSGSFAGFSGSSGSVSLSPPAINTDWVHVSCFSSPCYDQTEQAGNLHSTGNSLSGIFSNPQESVPRIPLQAPMNLPLSDSAFTVQEQNFLDSVFENRGWSLRNGFMSAMTEQMDGVSPETGHTATHMDPEISSFISSFGNQQNPSASYAAPAPVDLDNLNNFCSYYSY 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g1877 242 ProSiteProfiles NAC domain profile. 18 170 IPR003441 GO:0003677|GO:0006355
Lele22g1877 242 Pfam No apical meristem (NAM) protein 19 73 IPR003441 GO:0003677|GO:0006355
Lele22g1877 242 Gene3D NAC domain 27 78 IPR036093 GO:0003677|GO:0006355
Lele22g1877 242 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 17 73 - -
Lele22g1877 242 SUPERFAMILY NAC domain 14 73 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g1877 Lele-ChrLele22 23643176 23644388 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g1877 11 73 NAC Transcription Factor Family AT3G29035 69.841 2.17e-25 100
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele22g1877 NAM 3.2e-14 No_clan