Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g1872 ATGGCCACCGTCACCACCCAGGCTTCCGCCGCCGTCTTCCGGCTATCATGCTCCTCCAGATCCAGATTCCTCACCGGATCCTCAGGTAAATTGCAGAGGCAAGTCGGCTTCAGAACCGTGACGCCTCCTTCCTCTTTCAAGGTCGAAGCCAAGAAAGGAGAGTGGCTTCCTGGTCTTCCCTCACCAGCTTACCTAAATGGAAGTCTTCCGGGTGACAATGGATTTGACCCTCTGGCGCTAGCAGAGGACCCAGAGAACTTGAGGTGGTTCGTGCAAGCTGAACTGGTGAATGGAAGGTGGGCAATGTTGGGAGTTGCAGGGATGCTTCTTCCAGAAGTGTTCACAAAGATCGGGATCCTCAATGTTCCAAAGTGGTACGATGCAGGAAAAGAAGAGTACTTTGCATCATCATCAACCTTGTTCGTGATTGAGTTCATTTTGTTCCATTACGTTGAGATCAGAAGATGGCAAGACATAAAGAACCCTGGAAGTGTCAACCAAGATCCCATCTTTAAGCAATACAGCTTACCCCCTAATGAAGTTGGATACCCAGGTGGCATCTTCAACCCTCTCAACTTTGCACCAACACTTGAGGCCAAAGAGAAGGAAATTGCTAATGGGAGATTGGCGATGCTGGCGTTTTTGGGATTTGTGGTTCAACACAACGTGACGGGCCAAGGGCCATTTGACAACCTGTTGCAGCATCTTGCAGACCCATGGCACAACACAATTGTTCAAACTCTGAGGGGAAACTGA 756 0.496 MATVTTQASAAVFRLSCSSRSRFLTGSSGKLQRQVGFRTVTPPSSFKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLALAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVFTKIGILNVPKWYDAGKEEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNFAPTLEAKEKEIANGRLAMLAFLGFVVQHNVTGQGPFDNLLQHLADPWHNTIVQTLRGN 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g1872 251 FunFam Chlorophyll a-b binding protein, chloroplastic 62 241 - -
Lele22g1872 251 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 20 247 IPR001344 GO:0009765|GO:0016020
Lele22g1872 251 SUPERFAMILY Chlorophyll a-b binding protein 52 248 - -
Lele22g1872 251 Pfam Chlorophyll A-B binding protein 62 221 IPR022796 -
Lele22g1872 251 Gene3D Chlorophyll a/b binding protein domain 62 241 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g1872 Lele-ChrLele22 23610276 23611206 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g1872 55 244 Chloroplast and Mitochondria Gene Families AT3G61470 57.653 2.02e-75 228