Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g1864 ATGAAGAAGGTGGTAACAAGAGTTGACAGCACGGTGGTTCGAAACATTCGATACGGTGAATGTCAGAAGAATCATGCAGCTTCCATTGGAGGCTATGCTGTGGATGGTTGCAGAGAGTTCATGGCCAGTTCCAGAGAAGGAACAAGTGGGGCTCTTACTTGTGCGGCTTGCGGCTGCCACCGCAATTTCCACAGAAGACGAGAGCAAGTCGTCGAGTCGTCTGTGATGTGGATTGTCCAACAGATTCCATTCTTGATTTCTTGTCAAGGATTTATATTGGAAACTTCAGATTCTCAGAGCAAGAAAACAGGTTAG 315 0.4667 MKKVVTRVDSTVVRNIRYGECQKNHAASIGGYAVDGCREFMASSREGTSGALTCAACGCHRNFHRRREQVVESSVMWIVQQIPFLISCQGFILETSDSQSKKTG 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g1864 104 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 14 70 - -
Lele22g1864 104 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 18 67 IPR006456 -
Lele22g1864 104 Pfam ZF-HD protein dimerisation region 16 68 IPR006456 -
Lele22g1864 104 TIGRFAM ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain 17 67 IPR006456 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g1864 Lele-ChrLele22 23567560 23568835 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g1864 13 83 Zinc finger-homeobox gene family AT3G28917 66.667 5.82e-29 99.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Lele22g1864 ZF-HD_dimer 8.3e-30 No_clan