Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g1855 ATGGAAGGAGGTGATGATCTCCACCACCACCACCCGCATCACCGCCGTCCCACCTTTCCCTTTCAGCTCCTCGAGAAGAAAGAAGATCAAGAAGCTGCTCCTTGCTCCACCTCTTCTCCTTACCCTTCCTTGGCCATCTCTGCTGAACCTGCTGCCTCCTCCAATCCCAACCGATCCAATAACCAGATCGTCCCCTCCACGGAACCCTCCTCCAATAAAAAGCCTCCGCCTAAGAGAACCTCCATCAAGGACCGCCACACCAAGGTCGACGGACGAGGCCGTCGCATTAGAATGCCTGTCCTATGTGCCGCTCGTGTCTTCCAGCTCACCCGCGAGCTTGGCCACAAGTCTGACGGTGAAACCGTCGAGTGGCTGCTCCAGCAGGCTGAGCCCGCTGTCATCGCTGCCACCGGCACTGGAACCATCCCGGCTAACTTCACTTCGCTTAACATATCCTTGAGAAGCTCGGGATCCACTATGTCGGTCCCGTCTCAGTTAAGATCCTCCTACTTTAATCCCAACTTCTCCGTCCAACAGCGCCGGAGTCTGTTCCCTGGAATTGGTCTGTCTTCCGATAACACCACCGCCTCTGCGCTTCTAAATTTTCAATCCAGTAACACAACCACGAACCTGTTGCAAGCCAAGCAAGAGCTGCACGACGGGGCTGGTCCGCCTTTGGCTGCTATGTCGTTGGATTTGTCGCCGGACACCCCAGAAGAAGGGATGGGAAGAAAACGGCGGCCGACGGATCAGGACTTGTCGTCAACGCAGCATCAAATGGGGAGTTATTTGCTGCAGTCAAGCGCCGGGGCGATCCCGGCTAGTCATGCTCAGATTCCGGGCAACATTTGGATGGTGACGAATTCAAGTAACCAGGTCATGAGCGGTGATCCTATATGGACATTCCCGCCGGTAAACAACGGTGGATTGTATAGGGGAAGCATGTCGAGCGCGTTGCATTTCATGAACTTCCCTACACCTATGTCCTTATTGCCGGGTCAACAATTAGGTTCGTCGGGGATAAGTAGTGGCGGCGGCGGCGGCGCTGCATCAGGCGGCAACAATATTAACGAAGGACATTCGAGTATGCTGGCAGGGCTAAGCCCGTACCGGCCTGTGATCGGGCTGTCAGAATCTCAGGCGAGTGGATCCCAATCACATCACGGTGGCGGAGGCGACGACCGGCACGACACCACCAGCCACCACTCATAG 1212 0.5586 MEGGDDLHHHHPHHRRPTFPFQLLEKKEDQEAAPCSTSSPYPSLAISAEPAASSNPNRSNNQIVPSTEPSSNKKPPPKRTSIKDRHTKVDGRGRRIRMPVLCAARVFQLTRELGHKSDGETVEWLLQQAEPAVIAATGTGTIPANFTSLNISLRSSGSTMSVPSQLRSSYFNPNFSVQQRRSLFPGIGLSSDNTTASALLNFQSSNTTTNLLQAKQELHDGAGPPLAAMSLDLSPDTPEEGMGRKRRPTDQDLSSTQHQMGSYLLQSSAGAIPASHAQIPGNIWMVTNSSNQVMSGDPIWTFPPVNNGGLYRGSMSSALHFMNFPTPMSLLPGQQLGSSGISSGGGGGAASGGNNINEGHSSMLAGLSPYRPVIGLSESQASGSQSHHGGGGDDRHDTTSHHS 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g1855 403 MobiDBLite consensus disorder prediction 33 76 - -
Lele22g1855 403 MobiDBLite consensus disorder prediction 336 362 - -
Lele22g1855 403 MobiDBLite consensus disorder prediction 18 32 - -
Lele22g1855 403 MobiDBLite consensus disorder prediction 220 258 - -
Lele22g1855 403 ProSiteProfiles TCP domain profile. 82 136 IPR017887 -
Lele22g1855 403 MobiDBLite consensus disorder prediction 379 403 - -
Lele22g1855 403 MobiDBLite consensus disorder prediction 238 252 - -
Lele22g1855 403 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 40 390 IPR005333 GO:0003700
Lele22g1855 403 MobiDBLite consensus disorder prediction 1 95 - -
Lele22g1855 403 MobiDBLite consensus disorder prediction 336 364 - -
Lele22g1855 403 MobiDBLite consensus disorder prediction 389 403 - -
Lele22g1855 403 Pfam TCP family transcription factor 81 210 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g1855 Lele-ChrLele22 23499915 23501126 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g1855 73 395 TCP Transcription Factor Family AT3G47620 44.526 1.93e-61 204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Lele22g1855 TCP 1.1e-37 No_clan