Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g1853 ATGGAAAGAGATCTAGATGAGCATGGTGCTGCTATCCTAAAGCATGGTAAAACCTCTCAGTCATTGTCTCTTTCTGAGCTCTTTACGCTAAAGGATGGATCGGTAACACCAGTACTAAAGCCAGCAAATCCTCCTGTAAGAGCTAATGTGTTGTATTTGAGCACTGAATTCTCAGCTCCCATAGCGAAGGCTGTAAAAAATATTTTCCACCCATACTTTGATAAAGCAATCTGGTTTCAGAAATCTAGTATGTACCACTTCAGCATGTTTCACGCCTCGCATCACATTGCACCTGTACCTGCCGCCAAAGAAGAGACCGATGCTGAAGCAGCCTCTGTGCAAGCTGTTGCTCAGACATTCTGCCCTTTGAATATTGTCTTAGATAGGGTGGTTCTGACTTCAACAGGAGTGCTTTTGGGTTGTTGGCAGGTCACCTCTGGGACAGTTCCCATAGCTATTCGTGCTAAGTTGAGAAATGTGCTTCCACACGCACCAGAGAAGCAACTTGAGCTGCAAACAACCTCAGATGAACTTCAATTCTTCCATGAGCTAGTTAATCGACTCAACACAGACCTCCATGGGTTCGAGGCAACGGTGTCTGAACTCTGGTATGTGGAGGAACATGATTTGCTTGCGCTTGCACTGAACGGAAGAATGAGCGTTCGCAGGTTCTGGCGTATGTGGGTTGATTCCAATGAATTTCTGTATGCCCCTCTTTGGTTGCTTGCCGGTAGACTTCTATGGAACAAGTGGTCTTTGGAAATGAAACTTGGGGAATTGGGGGATTGTGAGGAGATGCGAAAGTGGAGGCAGATGGAGTACTCTGCCTCCAGACTTATCTTAATAACTTATAGTTATGTTTACTTGTTTTATAGCCTTCTGAACTACTGGGGAACTTTTGTGCTGGAAGAATTGTGTAAAGGCATCCCTTGCTTTTGTTACTTCTTTATGGGATCAGAAGCTCCCGATCTGGCAACTGAGGAAGTTAATATGTTAGAAGGAACATCAAAAACCAGTTCTTGTCCAGGTAAAAAGAACCAGGGGAAAATCCCCAAAATAATTCACAAGGCTGAAAGGGAGAAAATGAAGCGTGAGCATTTGAATGATCTCTTTCTTGATCTTGCCAATGCTATTGAACTAGGTCAGCAGCAAAACAATGGAAAGGCGTCCATATTGTGTGAAGCCACTAAGCTGCTAAGGGACCTGCTTGGTCAGATTGAGACACTTAAGGAGGAGAATGTGTCACTGCTGTCTGAATCACATTATGTCACCATGGAGAAGAATGAGCTGAAGGAGGAAACTTCTGCTCTAGAAACACAAATCGAGAAACTTCAAGGCGAGATAGAAGCACGAGTAGCACAATCTAAACCCGACCTAAATGCGCCTCCTCCAATGGAACTTGAGCCACCAGAGCAAACAACAATTTTTCCCAGAGAGTGTCTCCAACTGCCTGCTGATCCTACATTGCAACAAGGAACTGCTGTATTAGTTGTCCCCTTTCGTCCTCACCTTCAACCTTCTTTTCCCATTCCCAACATGGCCGAGCTCACCGCGAACTCGGTCGTGAGTAAACCTCATGCCAGGTATCCCACCCTTGCAGACTCATGGCCATCGCAGCTGCTGGGAGGGCAGCCAACATCAAGCTAA 1647 0.4554 MERDLDEHGAAILKHGKTSQSLSLSELFTLKDGSVTPVLKPANPPVRANVLYLSTEFSAPIAKAVKNIFHPYFDKAIWFQKSSMYHFSMFHASHHIAPVPAAKEETDAEAASVQAVAQTFCPLNIVLDRVVLTSTGVLLGCWQVTSGTVPIAIRAKLRNVLPHAPEKQLELQTTSDELQFFHELVNRLNTDLHGFEATVSELWYVEEHDLLALALNGRMSVRRFWRMWVDSNEFLYAPLWLLAGRLLWNKWSLEMKLGELGDCEEMRKWRQMEYSASRLILITYSYVYLFYSLLNYWGTFVLEELCKGIPCFCYFFMGSEAPDLATEEVNMLEGTSKTSSCPGKKNQGKIPKIIHKAEREKMKREHLNDLFLDLANAIELGQQQNNGKASILCEATKLLRDLLGQIETLKEENVSLLSESHYVTMEKNELKEETSALETQIEKLQGEIEARVAQSKPDLNAPPPMELEPPEQTTIFPRECLQLPADPTLQQGTAVLVVPFRPHLQPSFPIPNMAELTANSVVSKPHARYPTLADSWPSQLLGGQPTSS 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g1853 548 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 351 402 IPR011598 GO:0046983
Lele22g1853 548 Pfam Helix-loop-helix DNA-binding domain 355 402 IPR011598 GO:0046983
Lele22g1853 548 Gene3D - 346 419 IPR036638 GO:0046983
Lele22g1853 548 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 355 426 IPR036638 GO:0046983
Lele22g1853 548 CDD bHLH_AtILR3_like 356 431 - -
Lele22g1853 548 PANTHER TRANSMEMBRANE PROTEIN 172 224 - -
Lele22g1853 548 Coils Coil 427 447 - -
Lele22g1853 548 Coils Coil 399 419 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g1853 Lele-ChrLele22 23485829 23492380 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g1853 317 542 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G47640 47.154 1.37e-58 193
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele21g1885 21 26182152 26184409 Lele22g1853 22 23485829 23492380 ECH
Lele22g1853 22 23485829 23492380 Lele22g1853 22 23485829 23492380 ECH
Lele22g1853 22 23485829 23492380 Lele23g0130 23 841601 844194 hybridization
Lele22g1853 22 23485829 23492380 Lele24g1803 24 23097605 23105828 hybridization